| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2932 |
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| Symbol | |
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| ID | 3626517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 3757060 |
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| End bp | 3758646 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637701777 |
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| Product | histone deacetylase |
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| Protein accession | YP_306407 |
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| Protein GI | 73670392 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00716511 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTGG GGCTTGGAAG ACTCAAGGAT GCGCTGAAGA ATGGCTCAGG AACAGCTTCA
GTAGATGGGG AAAAAGAGCA GGCAGAAAAT AAAGATAAAG CCGAGAAAGA AGAGATGCAG
ACGATAAAAA GTAAAGAAAA CATGCCTGAA ATATCCGAGG AAAAGGAGGG AAATACAATG
GAACTGAAAA AAACCGGGAT GGAAGTGAAA AAAGGACTAT TATCCCCGGC AGACCGCACT
GGGGCCGAGA AGACAGGCCT TATTTTCTTC CCCGCCTTTG ACTGGGCTAT TTCACCAACT
CACCCCGAAA GAGAAGAGCG CCTTCTTTAT ACGAGAGATC AGATCTTTGA AGAAGGTCTG
ATGGATTTGC CAGAAATAGC CGAATATAAA CCTCGCCTTG CAGAGTACAG GGATATTGCC
AGGGTTCACT TCTGTGTGCC TGACATAAAA GCCCAGGCTA CAACCCCTCA CCTGATTGCA
GCAGGCAGTT GCCTGGTGCT TGGGGATGCC CTGATGAAGG CAGAGGTCAA AAATGCTTTT
TCGCTTATCC GTCCGCCTGG ACATCATGCA ATGACAGTCT CACATGGGAA CCGGGGATTT
TGTAATATCA ATAACGAAGC TATCCTTGTC GAGTATCTAA GAAAAACATA CGGGATACGC
AAGATTGCGA TTGTGGATAC CGATGTGCAT CATGGGGATG GGACTCAGGA TATTTTCTAT
AATGATCCTG ATGTGCTTTT TATTTCCTTC CACCAGGACG GGAGAACTCT TTTCCCTGGC
TCGGGCTTTA TGAGTGAACT GGGAGGCCCA AAAGCCCTTG GAAGGACGAT CAATATTCCT
CTGCCGCCAG GGACCCCTGA TGAAGGAATA CTTTACGTGC TCGATTCACT TGTGCTTCCA
ATTCTTGAGG ATTTCAAACC TGAGCTTGTC CTGAATTCTG CGGGACAGGA TAACCACTAC
ACTGACCCTC TCGCAAATAT GCGCTTTTCC ACACAGGGTT ATGCAAAATT GAATGAAAAA
CTTGCTCCTG ATATGGCCGT GCTTGAAGGA GGTTACGCAA TCCAGAGTGC ACTGCCTTAT
GTGAATACAG GTATAATCCT TGCAATGGCA GGGCTTGATT ATTCCTGTGT AAGGGAACCT
GACTTCAAGC CAGGCATGTT TGTCCAGGCT TCAAGGGATA GAAAAACCCT GGAAGAAATA
GTTGCAACCC AGCTTGAAAA CTGGAAAAAC AGGGACAGAC TCGTAGAGGC TGAAGTGGCA
AAACACGGAG ACTTTTACCG CCGAAAAAAA CAGATCTTTT ACGATACGGA TATGATTCAG
GAGTTCCAGG AAGAAACCAT CCGTATGTGC CCTGACTGCC TGGGCTACAA AACCATTGAC
TCCCATGCTC ATGGGGGCGC AGGCAATCCC AGGATCTTCG GGGTTTCGAT TCCGATCTAC
GCCTGTGAGA AGTGCCAGGC TGAAGCCAGG GAAGAGTACA GGAAAAGGCT AATTCATCCG
GAATATGATT ACGTTTACCT GCAGGATAAA AAACAGGATG AATACAGAGC GTATAATACA
AGAACAAAGA AGGAAAAAGT TTATTAA
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| Protein sequence | MKLGLGRLKD ALKNGSGTAS VDGEKEQAEN KDKAEKEEMQ TIKSKENMPE ISEEKEGNTM
ELKKTGMEVK KGLLSPADRT GAEKTGLIFF PAFDWAISPT HPEREERLLY TRDQIFEEGL
MDLPEIAEYK PRLAEYRDIA RVHFCVPDIK AQATTPHLIA AGSCLVLGDA LMKAEVKNAF
SLIRPPGHHA MTVSHGNRGF CNINNEAILV EYLRKTYGIR KIAIVDTDVH HGDGTQDIFY
NDPDVLFISF HQDGRTLFPG SGFMSELGGP KALGRTINIP LPPGTPDEGI LYVLDSLVLP
ILEDFKPELV LNSAGQDNHY TDPLANMRFS TQGYAKLNEK LAPDMAVLEG GYAIQSALPY
VNTGIILAMA GLDYSCVREP DFKPGMFVQA SRDRKTLEEI VATQLENWKN RDRLVEAEVA
KHGDFYRRKK QIFYDTDMIQ EFQEETIRMC PDCLGYKTID SHAHGGAGNP RIFGVSIPIY
ACEKCQAEAR EEYRKRLIHP EYDYVYLQDK KQDEYRAYNT RTKKEKVY
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