| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2791 |
|---|
| Symbol | |
|---|
| ID | 3625119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 3562367 |
|---|
| End bp | 3563221 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637701642 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_306272 |
|---|
| Protein GI | 73670257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000798761 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000821191 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAA AAATTGTGTT ATTCATTAGT GTTCTTATGA TCTCATTGCA AGGAACTACA
GCGTATGGTA TGGGCATTGG AGTGAACCCA GGAAATATGA GTTTTAAACT TGCTCCTGGG
ACGTCCGCAG AGCAACAGAT ATATGTGATA AATACAGGAA ATGAAACTGC AAGATATGAT
GTTTTTGTTA ATGAAAGTGC TTATCAAAAT TGGTTTACCT TTTCTCCCTC CTCCTTTGAT
CTAAAAGCAG GAGATACGAA AGAAGTTAAA GTCACGCTCA AAGTTCCCGC TTCCGCTGAA
ACAGACATTA AATGTAAAAT ATATGTTCCA TGTACCGTAC CAGGAAGATC GGTTGGGGCA
GGGGTCATAA TCCCTGTTTA TGTTGAGCTC TCCACATTAG AAGAGAGTTC TTCTAAAGAA
GTTTCTTCCG AGAGTGGTTC TTCTAAAAAA ATCTCTTCTG ACAGTAGTTC TTCAAAAGGA
ACAGAAAACT CCTCAGATCC TTTAGCTAAA ATAGAAATCA ATGAGACCTT GCAGCAATCT
TTGGAAAAAA ACATCGACAA CGGGCTTAAT TTTACTCAGA ATGTTACTCA TATAGATGAG
GAACTAAAAG ATTACACTGG AAATTTGCAA GCAATTGTGA CCAAGAGTAT TGACAATGCA
ACCAGAAGTT TTGAAGTTAC TACAAAGAGT CTTGGTGATA CAATCAAAAG CCTTGATGAA
AAAAATACTT TTGCTCTGAC CAAAATTGAA AGTTATGAAG AAAAGTTCCA TGTTTTACCT
GGCTTTAATG CACCCCTTGC GTATGTATGC CTGATGATTT CAGGGCTGCT AATGAGAAGG
CGGCTACTTA AATAA
|
|---|
| Protein sequence | MRVKIVLFIS VLMISLQGTT AYGMGIGVNP GNMSFKLAPG TSAEQQIYVI NTGNETARYD
VFVNESAYQN WFTFSPSSFD LKAGDTKEVK VTLKVPASAE TDIKCKIYVP CTVPGRSVGA
GVIIPVYVEL STLEESSSKE VSSESGSSKK ISSDSSSSKG TENSSDPLAK IEINETLQQS
LEKNIDNGLN FTQNVTHIDE ELKDYTGNLQ AIVTKSIDNA TRSFEVTTKS LGDTIKSLDE
KNTFALTKIE SYEEKFHVLP GFNAPLAYVC LMISGLLMRR RLLK
|
|---|
| |