| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2755 |
|---|
| Symbol | |
|---|
| ID | 3624999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 3502798 |
|---|
| End bp | 3503496 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637701608 |
|---|
| Product | phosphoribosylformylglycinamidine synthase I |
|---|
| Protein accession | YP_306238 |
|---|
| Protein GI | 73670223 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
|---|
| TIGRFAM ID | [TIGR01737] phosphoribosylformylglycinamidine synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000714476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00646528 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTG CCATACTTCA GTTCGGAGGC ACAAACTGCG ACCAGGACGT CCTGCATGTC
CTTAAAGACG TTGTGGGTGT GGACGCCGAG ACTGTCTGGT ACAAACAGGA AGATCTGACA
GGTTTTGACG GAGTCGTCGT TCCCGGAGGC TTCTCCTACG GAGACTATCT CAGGGCAGGA
GCAATTGCAG CCCGCACTCC AATAATGAAC TCAGTAAAAA AACTCGCAGC CGAAGGTAAG
CCGGTACTTG GAATCTGCAA TGGCTTCCAG ATTCTTACCG AAGCCCGGGT GCTTGAGGGT
GCTCTGACAA CTAACGAGTA CCCGAAATTC CGATGCCACT GGACGAACCT CAGGGTAGAG
ACCGTTGATA CACCTTTCAC CTCGAAGTTC AGGAAAGGAG AGGTTATCAG AATGCCCATT
GCCCATATGG AAGGTCAGTT CTATGCCGAA GAGAAAACCC TGGCCGAGCT TGATGAAAAT
GAGCAGGTTG TCTTCCGCTA TGTGGATGAA AACGGAAAAG TAACGGATGA AGCTAATCCT
AATGGTTCTC TAGAAAATAT CGCAGGAATT GTAAACACTT CGAGGAATAT CTTCGGTCTC
ATGCCCCATC CAGAAAGAGC CTCCGAGTCA ATTCTGGGCT CAGACGATGG CCTGCGGGTT
TTTGAGTCTA TGGTGGATTA TATTACTGAG AACTTCTGA
|
|---|
| Protein sequence | MKIAILQFGG TNCDQDVLHV LKDVVGVDAE TVWYKQEDLT GFDGVVVPGG FSYGDYLRAG
AIAARTPIMN SVKKLAAEGK PVLGICNGFQ ILTEARVLEG ALTTNEYPKF RCHWTNLRVE
TVDTPFTSKF RKGEVIRMPI AHMEGQFYAE EKTLAELDEN EQVVFRYVDE NGKVTDEANP
NGSLENIAGI VNTSRNIFGL MPHPERASES ILGSDDGLRV FESMVDYITE NF
|
|---|
| |