Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2744 |
Symbol | |
ID | 3624988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3487929 |
End bp | 3489335 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701597 |
Product | glutamate decarboxylase |
Protein accession | YP_306227 |
Protein GI | 73670212 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0749502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000505067 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTTCGA AGAAAGTAAA TCTGGAAACT TTAGATGAGT CTAAAAAGTA TCGTGTTGGC GCATACAGTG CCAGATATAT CCCACAGGTC AAAGAAAAAG GAATTCCCAA GTACGAATTT CCTGAAGAGG GAATGAGTCC GAGAGCTGCT TATCAACTGG TACATGATGA ACAGAGCCTC GACGGCAATC CCTTCCTGAA CCTGGCAAGT TTTGTCAACA CATGGATGGA ACCGGAAGCA GACAAGCTTG TCATGGAAAA CATAAATAAA AATATCATAG ATATTTTTGA ATATCCTCAA ACTGACAAAG TTATCCAGAG TAATATTGTG AATATGCTTG GGCGCCTTTT TAATGGGCAT CATACCAAAT TTATGGGTAC GGCAACGGCT GGCTCTTCAG AAGCTATAAT GTTGGGTTTG CTGGCTCACA AATGGAGCTG GAAAAACTCA GGGCGAGGCA CAGGCAAACC AAACATAATT TTTGGAAACG ACGCTCATGT TTGCTGGGAT AAGTTTGCCA AATACTTTGA CGTCGAAGCT AGAAAAATTC CTATAGACAA AGATGAACGT AAAATTTCGG CAGCCGCTGT CTCAGAGCAG ATTGATGAGA ACACAATCTG TGTTGGTTGC GTTCTGGGAA CAACTTTTAC AGGAGAAATC GATCCTGTAA AGGATATTAA TGATTTGCTT TTGAGATACA AAAAAGAAAA AGGTTGGGAC ATACCCATCC ACATAGATGC TGCAAGTGGC GGCTTCATAT TGCCATTTAC CGAACCTGAT TTTGAGTGGG ACTTCAGATT GGAAAGTGTA AAATCGATAA ACGTTTCGGG GCATAAATAC GGATTGACTT ATCCTGGCCT TGGCTGGCTG ATTTTCCGTG ATGAAAATGA CCTTCCCGAA GACCTGATTT TCCATGTAAA TTACCTTGGA GAAATGGAAG ATTCGTACAC CCTGAACTTT TCAGGAGGCA GTGCGATGGT TGTGGCCCAA TATTATAATA TTTTAAGATT CGGAAGAGCT GGCTATACTA GAATAATGAA AAATATCCTT GAAGTTTCCC AGGATCTCGC CGAGAAGGTT GACAGACTGG GCCGTTTCGA AATGCTGAAC AAAGGAGAAA GACTTCCCAT CATTGCTTTC AAACAAAAAG AGGAAACTGA TTATTCCCTG CAGCAACTCT CTTATAAGCT GAGGGAGAGG GGCTGGATAA TTCCCGCCTA CTGTCTTCCA GAAAATGCCG CAGATATCGA GATAATGCGT ATTGTCGTAA GAGAAAACTT CACTTCTGAC ATGGCAGCAA TTCTTGTTAA CGATATTGAA AATGCATGTC AGTTTTTTGA AAATGGTAGA AAATCCGAAA CAAAAAAACC CTGCCCACCT GATGATGGTA TGGTTCATAT TTGCTGA
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Protein sequence | MISKKVNLET LDESKKYRVG AYSARYIPQV KEKGIPKYEF PEEGMSPRAA YQLVHDEQSL DGNPFLNLAS FVNTWMEPEA DKLVMENINK NIIDIFEYPQ TDKVIQSNIV NMLGRLFNGH HTKFMGTATA GSSEAIMLGL LAHKWSWKNS GRGTGKPNII FGNDAHVCWD KFAKYFDVEA RKIPIDKDER KISAAAVSEQ IDENTICVGC VLGTTFTGEI DPVKDINDLL LRYKKEKGWD IPIHIDAASG GFILPFTEPD FEWDFRLESV KSINVSGHKY GLTYPGLGWL IFRDENDLPE DLIFHVNYLG EMEDSYTLNF SGGSAMVVAQ YYNILRFGRA GYTRIMKNIL EVSQDLAEKV DRLGRFEMLN KGERLPIIAF KQKEETDYSL QQLSYKLRER GWIIPAYCLP ENAADIEIMR IVVRENFTSD MAAILVNDIE NACQFFENGR KSETKKPCPP DDGMVHIC
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