Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2633 |
Symbol | |
ID | 3625652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3331390 |
End bp | 3332127 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637701490 |
Product | cell surface protein |
Protein accession | YP_306120 |
Protein GI | 73670105 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.186167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAATTT ACCTGACAAA TTCAAACCTG AATATATCTG CAGGGAATAT TATATCGGAG AATATACGAT ATGGAATGTG GATCTCACAT TCAAACTACA GCACAATTTC CAGAAATACG ATTAATGAAA GCAACTGGGG AATTCATCTA AACTCTTCGG ACAATAGCAC GCTTTCTGGA AATATTCTTG CTTTCAATTA TGTTTCAGGC CTTTCTATGT GCCCAGCCTG TGATAACAAC ACTATATTCA ACAACTATCT TAATAATATC TTTAACGTAG AAGTCGGAAA CCGGAGAAAT ACCTGGAATT CGGAAAAGAA AGCAGGCATA AATAGTACCG GTGGCCCATA TCTTGGAGAC AACTTCTGGG CAAGCCCGGG AGAAAAAGGT TTCTCTCAAA CCGCACAAGA TAAAGATAAA AACGGCGTTG CAGATATAAA ATATAACGGA AAATATAACG AAACCAACTT TACGGATTAT CTGCCACTTG TACCTGTATC CAATCCACAG CAGCAGGCCC CCTATGTTGA AAATTCCAGT ATAGATTTTA CAAATTCCAG TCCAGATTTT ATGAACTCGA GCACAAATTT TACGAATTCC AGTACAGGTC TTACGAACTC TAGTACTAAT AGTAAAAATC TCAGTAACGG CCTTACCGAT GTTGCTGTTC CAGAAGTGGC TATAACTCCT GTACCTGTAA AAAGCAGCTC AAAAGATGGC AATACCACAA CAAGCTGA
|
Protein sequence | MGIYLTNSNL NISAGNIISE NIRYGMWISH SNYSTISRNT INESNWGIHL NSSDNSTLSG NILAFNYVSG LSMCPACDNN TIFNNYLNNI FNVEVGNRRN TWNSEKKAGI NSTGGPYLGD NFWASPGEKG FSQTAQDKDK NGVADIKYNG KYNETNFTDY LPLVPVSNPQ QQAPYVENSS IDFTNSSPDF MNSSTNFTNS STGLTNSSTN SKNLSNGLTD VAVPEVAITP VPVKSSSKDG NTTTS
|
| |