Gene Mbar_A2512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2512 
Symbol 
ID3625607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3168531 
End bp3169241 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content46% 
IMG OID637701374 
Product3-oxoacyl-(acyl-carrier protein) reductase 
Protein accessionYP_306005 
Protein GI73669990 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0588198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.237046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAG CAGGTCAAAC AGCTCTTGTA ACCGGGGGGA GCAAAGGGAT AGGAAGAGCT 
ATCTGCCTTG CTCTGGCAAA AGAGGGAGCA AACATCGTTA TTGCAGCAAG GAATGAGAGT
GAAATCAAAG AGATGGTAAA TAAATTAAAA GCAATGGGCA GTAAAGCCAT GGCTGTCCAG
GCTGACGTGC AGAATGAGGA GGACGTAAGA CGCCTGATTT CAATGACAAT TGACAAATGC
GGCAGGCTTG ATATTCTTGT CAACAACGCA GGAGTGGCCT ACAAAAAAAA GCTGGAAGAT
ACCACCCTGG AAGAGTACAA TCAAACCATG GACACCAACT TAAAAGGAGT TTTTCTCTGC
ACAAAGTATG CAATTCCATA CATCAGGGAG AGCAATAATG GGAAAATCAT CAATATATCT
TCAGTAGGAG GATTACACGG GCTTCCGGAT TTTTCTGCAT ACTGTGCTTC GAAGTTTGGA
GTAAACGGCA TAACAGAGTC CGTTGCTGCC GAGCTGGAAG GAGAAATAAA AGTCTATGCA
ATCTGCCCGG GCGCTGTGGA TACGGATATG TACAGATCAC TCTTTTCGGA CAGACCTTCG
CTCAAGCCAG AGCACATCGC AGAAAAGGTG CTGGAACTTG CCTCGCCTGA TTCAAAAGTT
ACATCCGGGA AGATAATCGA GATACAGGCT CTTCCAGTCC CTCAGCTTTA A
 
Protein sequence
MSLAGQTALV TGGSKGIGRA ICLALAKEGA NIVIAARNES EIKEMVNKLK AMGSKAMAVQ 
ADVQNEEDVR RLISMTIDKC GRLDILVNNA GVAYKKKLED TTLEEYNQTM DTNLKGVFLC
TKYAIPYIRE SNNGKIINIS SVGGLHGLPD FSAYCASKFG VNGITESVAA ELEGEIKVYA
ICPGAVDTDM YRSLFSDRPS LKPEHIAEKV LELASPDSKV TSGKIIEIQA LPVPQL