Gene Mbar_A2484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2484 
Symbol 
ID3626943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3136794 
End bp3137531 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content42% 
IMG OID637701346 
Producthypothetical protein 
Protein accessionYP_305977 
Protein GI73669962 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.186682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAA ACGATAGGAT CAGTGCCTGT GGCAGGACTA TAGATTACGA GATTGTATAC 
AGTAAAAAGC GAAAAAGAGC AGCTATTTTA GTCCGCCCAG ACATGAAAGT CGAGTTTCGG
GCGCCTCAGG GTCTGAGTGC GGATACTATT CGGGGAATGG TTGAAGGAAA AGCTCGATGG
ATATTTAAGA AGCTTGAATG GTTCGAGGCA AACAAACTGC CTGATCAAAA AAAGCAGTAT
TGTGAAGGGG AAATTTATCT TTATCTGGGC AGATACTATC CTCTGAGAAT CATATTCGTG
AATAACGTTA AAAAACCCCA GGCTTTTTTC AAGGATTCCG AACTCACGGT TGAGATTTCT
GAGAATACTT CTGAAGATCA GCTTCCCTTT CTGGTGAAAG AATCAGTCTG GAACTTTTAT
AGCAAACGTG CCGAAGAGGA AGTTGCAAAG CTTCTGAATA TTTACTCAAA AAAGCTAGGG
GTAGCCACTC CGATTTTTAA GGTAAAGCAC CAGAAAAAGC GCTGGGGGAG CTGTTCTGCA
AAGAATGTAT TGAGGATAAA TTTCCAGCTT ATAATGGCCC CGTCAAAGCA GCTTGAGTAC
GTAGTGGTGC ACGAACTCTG CCACGTAAAA GAGAAAAATC ATTCTGCAAG GTTCTGGAAA
CTTGTCCGAG AACTCATGCC TGATTATGAA GAATACAAGA ATAGCCTGAA AAAAGACGGC
TGGAAATATG TGCTTTGA
 
Protein sequence
MRKNDRISAC GRTIDYEIVY SKKRKRAAIL VRPDMKVEFR APQGLSADTI RGMVEGKARW 
IFKKLEWFEA NKLPDQKKQY CEGEIYLYLG RYYPLRIIFV NNVKKPQAFF KDSELTVEIS
ENTSEDQLPF LVKESVWNFY SKRAEEEVAK LLNIYSKKLG VATPIFKVKH QKKRWGSCSA
KNVLRINFQL IMAPSKQLEY VVVHELCHVK EKNHSARFWK LVRELMPDYE EYKNSLKKDG
WKYVL