Gene Mbar_A2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2435 
Symbol 
ID3627871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3073081 
End bp3075726 
Gene Length2646 bp 
Protein Length881 aa 
Translation table11 
GC content43% 
IMG OID637701302 
Producthypothetical protein 
Protein accessionYP_305933 
Protein GI73669918 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0426299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.757251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACA AAGGAAGTAT GCGGGAAAAG ACCCTTAGAA TAGAGAGGTT TGCAGGCTAC 
CTTCTGCCAG TGGTTATATT TTCCCTGGCT TTGTGGACCC TGGATAGACA GATACATCAT
TTGCACTCAA TGTATGTACT CAGAAGTATT ACCAGCATTC CATTGAGCCA TATAGAGCTT
GCGTTCTTTT TAACTTTCTT GAGTTATCTG GCTTTAACAG GTTATGATTA CCTGGCAGTT
CGTCATATTA ATCACCCTCT GCCCTATAAG CAGACTGCCA GGGCCTCTTT TATCAGCACG
TCCATAAGTT ATAGTGTTGG TTTTAATGCC CTGACAGGAA GTTCCCTGAG ATACAGGTTG
TACTCAAGAA ACGGGCTGAA CCTACGCCAG ATCTGGGAAA TTATAATTTT CTGCATACTC
ACCTTCTGGG TCGGGTTTTG CTTTGTCGGA GGCTTGCTCT TCACATTCTA TCCTGTGAAA
CTGTCAGATT ACGTGCCCGA GATTCCTGTC CCGTTAAACC TTGTTGGAAT TCTTTTACTG
CTAAGTGTTG CTGTTTATTT CTTTTTCTCG TTCAGGACGT TGAATTTCAA GGCAAAAGGG
TACCAGATCA GGGTCCCTGA ACCGAAAATA GCGTTCTTGC AGCTTGTCTT ATCATCAGTG
GATTACCTGC TTTCGGGAAG TATTATCTAT TTCCTTTTAC CTTCAAATCC ACATCTTACC
CTGCTTCATG TCCTTGTGTT CTTTGCACTG GCGCAGATTA TAGGGCTAAT AAGTACTGTC
CCGGGCGGGC TCGGGGTTTT TGAAACTCTT ATGCTGTTTA TGCTGGAACC GTATTTCGGT
ACGGTCGATA TAATTAAACC GCTTCTCCTT TTCAGGACAA TTTACTATTT CGTTCCCTTC
CTTATTGGAC TGCTGGCCCT TATGTTCTAT GAATATCAAG AGAGAGACAA ATTCCTGAGG
AAAATTGAGA AAGCCACGTA TTCAAGCCTA TCCGAACTAA CACCTCGGAT CTTTTCGATT
CTTGTTTTCC TTGGAGGAGT TTCCCTTCTC TTTTCTGGAG CCCTGCCTTC AGATCCAAGG
TACCTGCATG ACCTTAATTA CCTTATTCCT CTTCCCTTAA TCGAAGTCTC AAGGCTTTTT
GGAAGCATTA TGGGGGTATT GCTCCTACTC CTGGCAAACG GCCTCTGGAA AAGAATTGAC
GGAGCCTATA TTCTTTCTCT TTCCGTACTC TTGATGGGTG GGATATTTGC CCTCTTGAAA
AACTTTGATT ACCATGAAGC TGCGATTCTT TTTACCCTGT TTTTCTTTTT GCTTCCCTGC
AGGAAATATT TTTACAGAAA ATCCTCGCTT ATGCATCAGT CTTTTAGCAG GAGTAATGTA
ATTGCAATAA CCCTGGTCTT CGTAAGCTTC GCATGGCTTG GATTTTTTTC ATACCATAAC
GTGAAATATT CAAACGAACT CTGGTGGCAG TTCGGGATCA ATTCCCAGGC TTCCAGCTTT
TTAAGGGCTA CAGTCGGAGC TTTTATTCTG CTTCTTGTTC TCGGGATGGC AAAAATCCTG
AGCCCTTTTT CCAGGGACAT TCACATGCCA GGAGCAGAGG AAATGGAGCT TGCAAAAAGA
ATTATTAACC AGAGTGAGGA AACGGCTGGA AACCTGGTGT TTACAGGAGA CAAATATCTG
CTTTTTGATG ATGAAAAAAA GGCTTTTTTG ATGTATGGAG TTTCCGGAAA GACCTGGGTT
GCAATGGGAG ATATCGTTGG AACCAGTAAT CAGGCAAAAG AGCTGATCTG GGACTTTTAT
GAAATGAGCA AGCTGCACCA GGGGAGGGCT GCTTTCTATG AGGTGAGCGA AAAATATATT
CCGGTTTATC TTGACCTCGG CCTGACCCTG ATAAAAATAG GGGAAGAGGC AAAAGTTTCC
CTAGAGGCTT TTACCCTGGA AGGAAGTACA GGCAAAGATT TCCGTTATAC CGTAAGGAAT
GTGGAGAAAA AAGGATACTG GTTTGAAATT GTCTCTAAAG AAGAGGTTCA GAGCCTTATG
CCTGAGCTCA AAAAGATCTC GGATGCCTGG CTCAAGTTAA AAGCAGGAAA AGAAAAGCGA
TTCTCAATTG GCTACTTTAA CGAGAAATAT CTGAGCAATT TCCCGATTGC CCTTGTCAGG
AACGAATCCG AAATCGTTGC TTTTGCAAAC ATCTGGACAG GCGCGGATAA TGAAGAAATT
AGTGTTGACC TCATGCGCCA CAGTCCCGAT GCTCCTGACA GGACGATGGA ATATCTTTTT
GTCAAACTCA TGCTCTGGGG AAAAGAAAAA GGGTACAGGC GCTTTTCACT CGGAATGGCT
CCACTTTCAG GGCTTGAAAC CCGGCAATTC GCTCCTATGT GGCATAAAAT CGGGTCTTTA
ATCTTTACCC ATGGAGAACA CTTTTATAAT TATAAGGGAC TGCGGGATTT TAAAGAAAAG
TTCAATCCCA TCTGGAGCCC GAAATATATC ACTCTTCCTA ATGGGTTTAA ACAGGGCTTT
GTCTTAAAAG ATATTGCAGC CCTGATTTCA GGAGGAGTAA AAGGGATTTT CTCAAAAGAA
AATAAACGAC CAGCAAGCCG TAGAGGAAAT CAACTACCTG AAAAGCCATC CGAAGAACTC
ACCTGA
 
Protein sequence
MTDKGSMREK TLRIERFAGY LLPVVIFSLA LWTLDRQIHH LHSMYVLRSI TSIPLSHIEL 
AFFLTFLSYL ALTGYDYLAV RHINHPLPYK QTARASFIST SISYSVGFNA LTGSSLRYRL
YSRNGLNLRQ IWEIIIFCIL TFWVGFCFVG GLLFTFYPVK LSDYVPEIPV PLNLVGILLL
LSVAVYFFFS FRTLNFKAKG YQIRVPEPKI AFLQLVLSSV DYLLSGSIIY FLLPSNPHLT
LLHVLVFFAL AQIIGLISTV PGGLGVFETL MLFMLEPYFG TVDIIKPLLL FRTIYYFVPF
LIGLLALMFY EYQERDKFLR KIEKATYSSL SELTPRIFSI LVFLGGVSLL FSGALPSDPR
YLHDLNYLIP LPLIEVSRLF GSIMGVLLLL LANGLWKRID GAYILSLSVL LMGGIFALLK
NFDYHEAAIL FTLFFFLLPC RKYFYRKSSL MHQSFSRSNV IAITLVFVSF AWLGFFSYHN
VKYSNELWWQ FGINSQASSF LRATVGAFIL LLVLGMAKIL SPFSRDIHMP GAEEMELAKR
IINQSEETAG NLVFTGDKYL LFDDEKKAFL MYGVSGKTWV AMGDIVGTSN QAKELIWDFY
EMSKLHQGRA AFYEVSEKYI PVYLDLGLTL IKIGEEAKVS LEAFTLEGST GKDFRYTVRN
VEKKGYWFEI VSKEEVQSLM PELKKISDAW LKLKAGKEKR FSIGYFNEKY LSNFPIALVR
NESEIVAFAN IWTGADNEEI SVDLMRHSPD APDRTMEYLF VKLMLWGKEK GYRRFSLGMA
PLSGLETRQF APMWHKIGSL IFTHGEHFYN YKGLRDFKEK FNPIWSPKYI TLPNGFKQGF
VLKDIAALIS GGVKGIFSKE NKRPASRRGN QLPEKPSEEL T