Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2435 |
Symbol | |
ID | 3627871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 3073081 |
End bp | 3075726 |
Gene Length | 2646 bp |
Protein Length | 881 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637701302 |
Product | hypothetical protein |
Protein accession | YP_305933 |
Protein GI | 73669918 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0426299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.757251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACA AAGGAAGTAT GCGGGAAAAG ACCCTTAGAA TAGAGAGGTT TGCAGGCTAC CTTCTGCCAG TGGTTATATT TTCCCTGGCT TTGTGGACCC TGGATAGACA GATACATCAT TTGCACTCAA TGTATGTACT CAGAAGTATT ACCAGCATTC CATTGAGCCA TATAGAGCTT GCGTTCTTTT TAACTTTCTT GAGTTATCTG GCTTTAACAG GTTATGATTA CCTGGCAGTT CGTCATATTA ATCACCCTCT GCCCTATAAG CAGACTGCCA GGGCCTCTTT TATCAGCACG TCCATAAGTT ATAGTGTTGG TTTTAATGCC CTGACAGGAA GTTCCCTGAG ATACAGGTTG TACTCAAGAA ACGGGCTGAA CCTACGCCAG ATCTGGGAAA TTATAATTTT CTGCATACTC ACCTTCTGGG TCGGGTTTTG CTTTGTCGGA GGCTTGCTCT TCACATTCTA TCCTGTGAAA CTGTCAGATT ACGTGCCCGA GATTCCTGTC CCGTTAAACC TTGTTGGAAT TCTTTTACTG CTAAGTGTTG CTGTTTATTT CTTTTTCTCG TTCAGGACGT TGAATTTCAA GGCAAAAGGG TACCAGATCA GGGTCCCTGA ACCGAAAATA GCGTTCTTGC AGCTTGTCTT ATCATCAGTG GATTACCTGC TTTCGGGAAG TATTATCTAT TTCCTTTTAC CTTCAAATCC ACATCTTACC CTGCTTCATG TCCTTGTGTT CTTTGCACTG GCGCAGATTA TAGGGCTAAT AAGTACTGTC CCGGGCGGGC TCGGGGTTTT TGAAACTCTT ATGCTGTTTA TGCTGGAACC GTATTTCGGT ACGGTCGATA TAATTAAACC GCTTCTCCTT TTCAGGACAA TTTACTATTT CGTTCCCTTC CTTATTGGAC TGCTGGCCCT TATGTTCTAT GAATATCAAG AGAGAGACAA ATTCCTGAGG AAAATTGAGA AAGCCACGTA TTCAAGCCTA TCCGAACTAA CACCTCGGAT CTTTTCGATT CTTGTTTTCC TTGGAGGAGT TTCCCTTCTC TTTTCTGGAG CCCTGCCTTC AGATCCAAGG TACCTGCATG ACCTTAATTA CCTTATTCCT CTTCCCTTAA TCGAAGTCTC AAGGCTTTTT GGAAGCATTA TGGGGGTATT GCTCCTACTC CTGGCAAACG GCCTCTGGAA AAGAATTGAC GGAGCCTATA TTCTTTCTCT TTCCGTACTC TTGATGGGTG GGATATTTGC CCTCTTGAAA AACTTTGATT ACCATGAAGC TGCGATTCTT TTTACCCTGT TTTTCTTTTT GCTTCCCTGC AGGAAATATT TTTACAGAAA ATCCTCGCTT ATGCATCAGT CTTTTAGCAG GAGTAATGTA ATTGCAATAA CCCTGGTCTT CGTAAGCTTC GCATGGCTTG GATTTTTTTC ATACCATAAC GTGAAATATT CAAACGAACT CTGGTGGCAG TTCGGGATCA ATTCCCAGGC TTCCAGCTTT TTAAGGGCTA CAGTCGGAGC TTTTATTCTG CTTCTTGTTC TCGGGATGGC AAAAATCCTG AGCCCTTTTT CCAGGGACAT TCACATGCCA GGAGCAGAGG AAATGGAGCT TGCAAAAAGA ATTATTAACC AGAGTGAGGA AACGGCTGGA AACCTGGTGT TTACAGGAGA CAAATATCTG CTTTTTGATG ATGAAAAAAA GGCTTTTTTG ATGTATGGAG TTTCCGGAAA GACCTGGGTT GCAATGGGAG ATATCGTTGG AACCAGTAAT CAGGCAAAAG AGCTGATCTG GGACTTTTAT GAAATGAGCA AGCTGCACCA GGGGAGGGCT GCTTTCTATG AGGTGAGCGA AAAATATATT CCGGTTTATC TTGACCTCGG CCTGACCCTG ATAAAAATAG GGGAAGAGGC AAAAGTTTCC CTAGAGGCTT TTACCCTGGA AGGAAGTACA GGCAAAGATT TCCGTTATAC CGTAAGGAAT GTGGAGAAAA AAGGATACTG GTTTGAAATT GTCTCTAAAG AAGAGGTTCA GAGCCTTATG CCTGAGCTCA AAAAGATCTC GGATGCCTGG CTCAAGTTAA AAGCAGGAAA AGAAAAGCGA TTCTCAATTG GCTACTTTAA CGAGAAATAT CTGAGCAATT TCCCGATTGC CCTTGTCAGG AACGAATCCG AAATCGTTGC TTTTGCAAAC ATCTGGACAG GCGCGGATAA TGAAGAAATT AGTGTTGACC TCATGCGCCA CAGTCCCGAT GCTCCTGACA GGACGATGGA ATATCTTTTT GTCAAACTCA TGCTCTGGGG AAAAGAAAAA GGGTACAGGC GCTTTTCACT CGGAATGGCT CCACTTTCAG GGCTTGAAAC CCGGCAATTC GCTCCTATGT GGCATAAAAT CGGGTCTTTA ATCTTTACCC ATGGAGAACA CTTTTATAAT TATAAGGGAC TGCGGGATTT TAAAGAAAAG TTCAATCCCA TCTGGAGCCC GAAATATATC ACTCTTCCTA ATGGGTTTAA ACAGGGCTTT GTCTTAAAAG ATATTGCAGC CCTGATTTCA GGAGGAGTAA AAGGGATTTT CTCAAAAGAA AATAAACGAC CAGCAAGCCG TAGAGGAAAT CAACTACCTG AAAAGCCATC CGAAGAACTC ACCTGA
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Protein sequence | MTDKGSMREK TLRIERFAGY LLPVVIFSLA LWTLDRQIHH LHSMYVLRSI TSIPLSHIEL AFFLTFLSYL ALTGYDYLAV RHINHPLPYK QTARASFIST SISYSVGFNA LTGSSLRYRL YSRNGLNLRQ IWEIIIFCIL TFWVGFCFVG GLLFTFYPVK LSDYVPEIPV PLNLVGILLL LSVAVYFFFS FRTLNFKAKG YQIRVPEPKI AFLQLVLSSV DYLLSGSIIY FLLPSNPHLT LLHVLVFFAL AQIIGLISTV PGGLGVFETL MLFMLEPYFG TVDIIKPLLL FRTIYYFVPF LIGLLALMFY EYQERDKFLR KIEKATYSSL SELTPRIFSI LVFLGGVSLL FSGALPSDPR YLHDLNYLIP LPLIEVSRLF GSIMGVLLLL LANGLWKRID GAYILSLSVL LMGGIFALLK NFDYHEAAIL FTLFFFLLPC RKYFYRKSSL MHQSFSRSNV IAITLVFVSF AWLGFFSYHN VKYSNELWWQ FGINSQASSF LRATVGAFIL LLVLGMAKIL SPFSRDIHMP GAEEMELAKR IINQSEETAG NLVFTGDKYL LFDDEKKAFL MYGVSGKTWV AMGDIVGTSN QAKELIWDFY EMSKLHQGRA AFYEVSEKYI PVYLDLGLTL IKIGEEAKVS LEAFTLEGST GKDFRYTVRN VEKKGYWFEI VSKEEVQSLM PELKKISDAW LKLKAGKEKR FSIGYFNEKY LSNFPIALVR NESEIVAFAN IWTGADNEEI SVDLMRHSPD APDRTMEYLF VKLMLWGKEK GYRRFSLGMA PLSGLETRQF APMWHKIGSL IFTHGEHFYN YKGLRDFKEK FNPIWSPKYI TLPNGFKQGF VLKDIAALIS GGVKGIFSKE NKRPASRRGN QLPEKPSEEL T
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