Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2380 |
Symbol | |
ID | 3626721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 3010084 |
End bp | 3011001 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701249 |
Product | hypothetical protein |
Protein accession | YP_305881 |
Protein GI | 73669866 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.691759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.155983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTA TATCTAATTT ATTTGGAAAA GATAAAACCC AAAATCTTTT CGAGGCTTGT AAATTAGGGC AGATAGAAAA TGTAGAGAAA TTTTTGAAAA GCGATAAAGT TGATATTAAC TCACAGGATG CATATGGTAA AACTGCTTTA AATTATGCGG TGAACAAAGG GTACAGAGAC GTTGTAGAAT TGCTTATTAA AGGTGGTGCC GATCCTAATA TTCAGGATGA AAACGGGGAT ACCGCTTTAA TTTCTGCGGC AAAAGTCGAA CGTGGAGATA TTGTTGAGCT GCTCATCAAA AGCGGTGCTG ACCTTAACAT TCAGGATAGA AACTACGAGA CGGCTTTGAA GTTTGCGGTA AAAGTAGGAT ACAGGAAAAT TGTTAAGCTT CTTCTTGAGG GCGGTGCCGA TCCTAATATT CAGGACAGAA ACGGTGAAAC GGCTTTGATT TCTGCTGCAA ATAGGGGGCA AAAGGATATT GTTGAGTTGC TCATTAAAGG TGGAGCAGAA GTTAATCTTC AGGACGAAAA TCTTAACACT GCTTTGATTG CTGCAGCAAA AATCGGACAT AAAAGTATTG TTGAGTTACT TCTTAAAGCC GGTGATGATC TTGATCTTCA GGACAAAAAT GGTAATACAG CTTTGACTTA TGCGGCAGAC AGGGGGTACA GAGATATTTT AGAATTGCTT CTTAATAGTG GTGCCAGTCT TGATATTCAA GAAGAAAACG GGCTTACCGC TTTGATGCTC TCAGCACAGG CAGGGGATAA GGATATTGTT GAGTTGCTTA TTAAAAGTGG TGCCGACCTT AATCTTCAGG ACGAAAATGG CAATACTGCC CTGGATATTG CGGCAGAAAT AGAGTTTACC GAGATTGTTG AGTTGCTTCG TCAAAGTGAC GCAAGTTTCA GGTCCTAA
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Protein sequence | MDFISNLFGK DKTQNLFEAC KLGQIENVEK FLKSDKVDIN SQDAYGKTAL NYAVNKGYRD VVELLIKGGA DPNIQDENGD TALISAAKVE RGDIVELLIK SGADLNIQDR NYETALKFAV KVGYRKIVKL LLEGGADPNI QDRNGETALI SAANRGQKDI VELLIKGGAE VNLQDENLNT ALIAAAKIGH KSIVELLLKA GDDLDLQDKN GNTALTYAAD RGYRDILELL LNSGASLDIQ EENGLTALML SAQAGDKDIV ELLIKSGADL NLQDENGNTA LDIAAEIEFT EIVELLRQSD ASFRS
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