Gene Mbar_A2380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2380 
Symbol 
ID3626721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp3010084 
End bp3011001 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content40% 
IMG OID637701249 
Producthypothetical protein 
Protein accessionYP_305881 
Protein GI73669866 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.691759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.155983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTA TATCTAATTT ATTTGGAAAA GATAAAACCC AAAATCTTTT CGAGGCTTGT 
AAATTAGGGC AGATAGAAAA TGTAGAGAAA TTTTTGAAAA GCGATAAAGT TGATATTAAC
TCACAGGATG CATATGGTAA AACTGCTTTA AATTATGCGG TGAACAAAGG GTACAGAGAC
GTTGTAGAAT TGCTTATTAA AGGTGGTGCC GATCCTAATA TTCAGGATGA AAACGGGGAT
ACCGCTTTAA TTTCTGCGGC AAAAGTCGAA CGTGGAGATA TTGTTGAGCT GCTCATCAAA
AGCGGTGCTG ACCTTAACAT TCAGGATAGA AACTACGAGA CGGCTTTGAA GTTTGCGGTA
AAAGTAGGAT ACAGGAAAAT TGTTAAGCTT CTTCTTGAGG GCGGTGCCGA TCCTAATATT
CAGGACAGAA ACGGTGAAAC GGCTTTGATT TCTGCTGCAA ATAGGGGGCA AAAGGATATT
GTTGAGTTGC TCATTAAAGG TGGAGCAGAA GTTAATCTTC AGGACGAAAA TCTTAACACT
GCTTTGATTG CTGCAGCAAA AATCGGACAT AAAAGTATTG TTGAGTTACT TCTTAAAGCC
GGTGATGATC TTGATCTTCA GGACAAAAAT GGTAATACAG CTTTGACTTA TGCGGCAGAC
AGGGGGTACA GAGATATTTT AGAATTGCTT CTTAATAGTG GTGCCAGTCT TGATATTCAA
GAAGAAAACG GGCTTACCGC TTTGATGCTC TCAGCACAGG CAGGGGATAA GGATATTGTT
GAGTTGCTTA TTAAAAGTGG TGCCGACCTT AATCTTCAGG ACGAAAATGG CAATACTGCC
CTGGATATTG CGGCAGAAAT AGAGTTTACC GAGATTGTTG AGTTGCTTCG TCAAAGTGAC
GCAAGTTTCA GGTCCTAA
 
Protein sequence
MDFISNLFGK DKTQNLFEAC KLGQIENVEK FLKSDKVDIN SQDAYGKTAL NYAVNKGYRD 
VVELLIKGGA DPNIQDENGD TALISAAKVE RGDIVELLIK SGADLNIQDR NYETALKFAV
KVGYRKIVKL LLEGGADPNI QDRNGETALI SAANRGQKDI VELLIKGGAE VNLQDENLNT
ALIAAAKIGH KSIVELLLKA GDDLDLQDKN GNTALTYAAD RGYRDILELL LNSGASLDIQ
EENGLTALML SAQAGDKDIV ELLIKSGADL NLQDENGNTA LDIAAEIEFT EIVELLRQSD
ASFRS