| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A2306 |
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| Symbol | |
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| ID | 3625176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2923817 |
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| End bp | 2926408 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637701178 |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_305810 |
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| Protein GI | 73669795 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.98495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAA ACAAGACTAC GGATCTAATA AGAAGGGCTC AACGAAATAA AGTAACTGCA
TTACGCTTGT CTTACAAAAA TCTTACTTCA TTGCCACCTG AAATCTCAGA GCTGAAAAAT
TTTACAAAGC TTTACATATC TTACAATCAA CTGACTTCAT TGCCACCTGA AATCTCAGAA
TTGAAAAATC TTAAGCAACT TGATATATCT TACAATCAAT TGACTTCACT ACCCCCTGAT
ATTTCAAAAT TGAAAAATCT TACTCAACTC AACATACGTA ATAATCAATT GACTTCGTTA
CCTCCTGGAA TATCAAAGTT GAAAAATCTT AAGCAACTTG ATATATCTGA AAATCAACTG
ACTTCGCTAC CTTCTGGGAT TACTGAGTTA AAAGATCTTA CTCAACTTTC TATCTCTAAA
AATCAACTGA CGTCGTTACC TCCTGAAATA TCAAAGTTGA AAAACCTTAA ACAACTTTCC
ATCTCTAGAA ATCAACTAAC GTCGTTACCT CCTGAAATAT TAGAGTTGAA ATCTCTTACT
CAAATTAACA TCTATGAGAA TCAATTGACT TCGCTACCTC ATGAAATATC AGAGCTGAAA
TCTCTTACTC AACTTTCCAT ATCTGGAAAT CAACTGACTT CATTGCCTTC TGAAATCGCC
AATTTAGAAA GCCTTACTCA ACTTGACATT TCTAGAAATC AATTGACGTC GTTGCCGCTG
GAAATCACAG AACTCAAAAA TCTTACTCAA CTTGACATAA GTTCTAATAA ATTGACTTCG
CTGCCGCCAG AAATTTTAAA ATTAGGTATA GATATTGAGT GGGGAAATAA TTCGGCAGAA
AAAGGAATAT TCTTAGAAGG AAATCCTCTT GAAAAGCCTC CAATAGAGAT TGTAAAACAG
GGTCGTGAGG CAGTTATCAA TTATTTCAAG TCATTGGAAG GTGAAAAGAA ACCGTTAAAT
GAAGTTAAAG TTTTGCTTGT AGGAGATGGA GAGGCAGGAA AAACCTCACT GTTAAAGAGG
CTCTTAGGCG AAGGTTTTGA TGGAAATGAA CATCAGACTC AAGGGATTAA TATCAAAAAG
TGGGGATTTA AAGACAAAGA TAAGGAAATA AAAGTTAATT TTTGGGATTT TGGTGGACAG
GAAATAATGC ATGCTACTCA TCAATTTTTC CTTTCCAAAA GAAGCCTTTA CATTCTTGTT
CTGGATTCTA GAAGGGATGA AAAAGCCGAG TACTGGCTCA AGCACATAAG GAGTTTTGGA
GGAGATTCTC CAGTACTGGT CGCCTTGAAC AAGATTGATG AAAATCCCTC TTTTGAGTTG
AATAGGAAGT TTTTGCAGGA GAAATACCCC TCAATAAAAG GTTTCTTCAG AATTTCTTGT
AAGGAGGATC GAGGAATTGA AGGATTTTCC CAAAAATTAA AAAAAGAACT TTTAAAAGTT
GAACATATGC AGATAGAATG GGCTAAAAGC TGGTTCGAGG TAAAGACAAA ATTAGAAAAA
ATGAGTTGCA ATTTTATTAC TTATGAAGAA TATCGAAATA TATGTCTGGA AGAAAATGTG
GGTGATAAGT CATCTCAAAA CACGCTTGTT GATTTTCTCA ATGATCTTGG AGTAATTGTA
CATTTTAAAG ATATCTCATT GCTCGATACA CATGTGCTTG AACCGAAGTG GATTACTGAA
GGCGTTTATA AGATCATAAA TTCGGAGATT CTAGCTAAGA AGAAGGGAGT TCTTCGATTC
AGTATGCTAG ATGAAATTTT AGAGCAGAAG AAAGAAGGCG ACTACTATTA TCCTCCTGAA
CGTTATGGTT ACATCATCAA TTTGATGAAA AAATTCGAAT TATGTTATTC AATCGACGAA
GAAACTGTGC TCCTTCCTGA CCTGCTAGCA GTTCCAGAAC CAAATTTTGA TTTTGATTCT
AATGAAGCTC TGAAGTTTTT CATTGAATAC GATTTTCTTC CACGTTCAAT TATGCCTCGT
TTTATAGTGA AGATGCACAG GGATATAAAA GATGATTTGC AGTGGAGAAC AGGTGTAGTT
CTCGAAAACA AACAATTTAA TTCCTGTGCT GTGATAAAAT CTGATAACGA GGCAAAGAGA
ATTTATATTA ATGTAAATGG ATGTCAGAAA CGAGACTATT TTTCAAGTAT ACTATTCAAT
TTGCGGGAAA TTAACCGGAG TTTTGAAAAG TTAAAAGCTA TCGAGAAAAT TCCCCTTCCT
GATGAATCCG AGATAGCTGT AAGTTACGAA CACTTAGTTA ATCTGGAAGA AATGGGCATT
GATTTATTTG TACCTGAAGG ATCAAAAAAG AAATATCGTG TGAGTGATTT GCTTGGAACA
GTCAACAACT TGAGTAAACA AGAAGAATTG TTAAAAGAAA TCCTTAACAT TCTGAAGAAG
AATAACGAAG ACGAAAAACT TGAGGAGATC TTTAAATTTT TAAAGAAAAT AGCTGATGAG
TCTGATAATG AGGAAACTTT ATTTAGAAAA TTAAATAAAG TTATTATGTT GAAACCCAGC
GTGGCGGGAT GTGGAGTTGA TTTCAACGAA GCAATTAACC TTTTTTTCAA AAGGAAAAGA
CAGAAATACT AA
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| Protein sequence | MESNKTTDLI RRAQRNKVTA LRLSYKNLTS LPPEISELKN FTKLYISYNQ LTSLPPEISE
LKNLKQLDIS YNQLTSLPPD ISKLKNLTQL NIRNNQLTSL PPGISKLKNL KQLDISENQL
TSLPSGITEL KDLTQLSISK NQLTSLPPEI SKLKNLKQLS ISRNQLTSLP PEILELKSLT
QINIYENQLT SLPHEISELK SLTQLSISGN QLTSLPSEIA NLESLTQLDI SRNQLTSLPL
EITELKNLTQ LDISSNKLTS LPPEILKLGI DIEWGNNSAE KGIFLEGNPL EKPPIEIVKQ
GREAVINYFK SLEGEKKPLN EVKVLLVGDG EAGKTSLLKR LLGEGFDGNE HQTQGINIKK
WGFKDKDKEI KVNFWDFGGQ EIMHATHQFF LSKRSLYILV LDSRRDEKAE YWLKHIRSFG
GDSPVLVALN KIDENPSFEL NRKFLQEKYP SIKGFFRISC KEDRGIEGFS QKLKKELLKV
EHMQIEWAKS WFEVKTKLEK MSCNFITYEE YRNICLEENV GDKSSQNTLV DFLNDLGVIV
HFKDISLLDT HVLEPKWITE GVYKIINSEI LAKKKGVLRF SMLDEILEQK KEGDYYYPPE
RYGYIINLMK KFELCYSIDE ETVLLPDLLA VPEPNFDFDS NEALKFFIEY DFLPRSIMPR
FIVKMHRDIK DDLQWRTGVV LENKQFNSCA VIKSDNEAKR IYINVNGCQK RDYFSSILFN
LREINRSFEK LKAIEKIPLP DESEIAVSYE HLVNLEEMGI DLFVPEGSKK KYRVSDLLGT
VNNLSKQEEL LKEILNILKK NNEDEKLEEI FKFLKKIADE SDNEETLFRK LNKVIMLKPS
VAGCGVDFNE AINLFFKRKR QKY
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