Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2296 |
Symbol | |
ID | 3625166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2910462 |
End bp | 2911652 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637701168 |
Product | transposase |
Protein accession | YP_305800 |
Protein GI | 73669785 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5659] FOG: Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00584103 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.663647 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAA TGGCAATCTA TTGTTGTAAA TGCTCTAACA ACCAATCACT AAGCCATTTT ATCTCAACTT CTCCTTGGCG TCCTGCAGAT CTCCTCAAAT CTGTTCGAAC ATATGCCATT AAAACTATAG GCAAAAATGG TGTTCTTATA CTTGACGAAT CAAGCATAAA AAAATCTGGA AATAGTTCTG TTGGAGTTTC TCATCAGTAT TGCGGCAACC TTGGAAAAAA GAATAATTGT CAGGTTGGTG TGTTCCTTGC TTATTTTAAG AAACAGAAGA GAATGTTGAT TGATGAGAGA TTATATCTCC CACAAAAATG GATTAATGAC AAGGCACGTT GTTTAAAGGC TAAAATTCCT CCTGAGAAAA TAAAGTTCCG AACCAAGCAT GAGCTTGGCC TTGAAATGAT TGATAACGCA ATAGAGGAAG GTATTCCTTT TTCCTATGTT ACAATGGATG GATTCTACGG TGAAAATCCG GAGTTATTGA CAGAACTTGA AAATAGAGGC TTAACTTTTG TTGCAGATGT AGCGGTCGAT ACTCTTGTTT ATATTGAGGA ACCATTAGTT GGGATTCCTG AAAAAAAGGG AACAAGAGGA AGAAAACCCA CAATTTCTAA GGTTTTGAAT ACATTATCAA CAAGAATTGA TTCTCTTTCC AGTTCAATTG ATGGATGGAA ACTTATCAAA GTTAGAAAAA CGGAAAGAGG GTACAAAAAA GTCTATTTTA AGGCTATAAA AGTTTGGAGA CGTCAAAATA AATTACCTTG TGAGAAGCCA TTATGGCTTC TCATAAGTAA AGATGTAGAG TCTAATGACA TTAAATATTC ATTATGTAAC GCTTCTGAGG ATACTTCATT AGACGAACTT GCAAAAATGC AGAGCTCAAG GTACTGGATT GAGAGAGCAT TTCAAGATGC AAAAGTATAT TGTGGAATGT CTGAATACAT GGTGAGAAGC TGGAATGCAT GGCATCACCA TATGGCATTG GTTATGCTTG CGATGCTTAT TCTGTTGTCG TACAAAATAA AATTTATGAA ATTTCATAAG ATTTCACTTC ATGGTGTCAT TTTGATTATG AAATTCCATA ATCCATTGAA GATATTAAAT GCGGGAGAGC TTGCAAGAAT ATTAAATCAT GATAATGAGA TGAGAGACAG AGCAAGAGCA AGTAGATTGA AAGGTTCTTG A
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Protein sequence | MRKMAIYCCK CSNNQSLSHF ISTSPWRPAD LLKSVRTYAI KTIGKNGVLI LDESSIKKSG NSSVGVSHQY CGNLGKKNNC QVGVFLAYFK KQKRMLIDER LYLPQKWIND KARCLKAKIP PEKIKFRTKH ELGLEMIDNA IEEGIPFSYV TMDGFYGENP ELLTELENRG LTFVADVAVD TLVYIEEPLV GIPEKKGTRG RKPTISKVLN TLSTRIDSLS SSIDGWKLIK VRKTERGYKK VYFKAIKVWR RQNKLPCEKP LWLLISKDVE SNDIKYSLCN ASEDTSLDEL AKMQSSRYWI ERAFQDAKVY CGMSEYMVRS WNAWHHHMAL VMLAMLILLS YKIKFMKFHK ISLHGVILIM KFHNPLKILN AGELARILNH DNEMRDRARA SRLKGS
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