Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2278 |
Symbol | |
ID | 3625130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2887882 |
End bp | 2889279 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637701151 |
Product | nitrogenase, subunit alpha |
Protein accession | YP_305783 |
Protein GI | 73669768 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01284] nitrogenase alpha chain [TIGR01860] nitrogenase vanadium-iron protein, alpha chain [TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000740744 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.119504 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATTAA AACTATTCTG TTGCGATGAA TGCATACCTG AGCGCCAAAA CCATGTTTAC ATAAAAGAAG AAGGAGAAGA CACAACTCAA TATCTCCCAC TCTCAAATAT AGAAACAATT CCAGGATCAT TATCTGAGAG AGGGTGCAGC TATTGTGGAG CAAAACTCGT TATTGGCGGA GTCATCAAAG ACTGTATTCA GATGATACAT GGACCGGTAG GATGTGCTTA TGATACCTGG CACACGAAAA GGTATCCCAG CGATAATGAC AATTTTCAAT TAAAATATGT TTGGTCGTCG GACACAAAAG AAAAACATAT TGTTTTCGGA GCTGAGAAGC AGCTCAAAAA AGCGATCAAG GAAGCTTTCA AAGAATTTCC AGAAATCAAG CGAATGTTTG TCTACACGAC CTGTACAACC GCATTGATAG GAGACGATCC TAAAGCAGTA TGTCGTGAGG TTGAGGAAGA GCTTGGAGAT GTAGATATAT TCGTTGTCGA ATGTCCAGGA TTCGCTGGAG TCAGTCAATC AAAAGGACAT CATGAGCTGA ACATCGGCTG GATGAGAGAT AAGATTGGAA CGCTTGAACC TGAAATTAAA AGCGAATACA CAATTAATGT CATTGGTGAC TACAATATTC AGGGAGATAC TTACGTATTA CAAAAATATT TTGATAAAAT GGGCATACAG GTCATTGCAC ACTTTACAGG AAATGTAACC TATGATCAAC TACGCTGTAT GCATAGGGCA AAGCTGAATG TGGTCAACTG CGCGCGTTCT GCAGGATATA TAGCCAACGA ACTTAAGAGA GTATATGATA TTCCAAGAAT GGATGTTGAT ACCTGGGGTT TTGAATATGT CAAGGTAGCA CTGAGAAAAA TTGGAGCTTT CTTTGGATTG GAAGACAAAG CTGAAGAAGT AATTGCAGAA GAGGTTGCAA AATACGAAGG AAAACTTAAC TGGTATAAGG AACGGCTCAA AGGAAAAAAG GTCTGTATCT GGACTGGTGG GCCAAGACTA TGGCACTGGA CAAAGGCTCT TGAAGACGAT TTAGGTATGG AAGTTGTTGC AATGTCTTCT AAATTTGGTC ATCAGGAAGA CTTTGAGAAG GTTATTGCCA GGGGAAGAGT CGGGACGATT TATATTGATG ACGGAAATGA ACTGGAGTTT TTCGAAGTAC TCGATAATAT TCACGCCGAT ATTATTTTTA CCGGGCCCAG AGTTGGAGAC TTAGTCAAAA AACTGCACAT TCCATACATT AACGGACATG CATATCACAA CGGTCCATAC ATGGGCTTTG AAGGCGCAGT AAACATGGCG AGAGATATGT ATAACGGAAT TTATTCTCCG ATGTGGAGTT TAGCTGGAAA AGATCCGAGA GTGGTGCAGG AATTATGA
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Protein sequence | MPLKLFCCDE CIPERQNHVY IKEEGEDTTQ YLPLSNIETI PGSLSERGCS YCGAKLVIGG VIKDCIQMIH GPVGCAYDTW HTKRYPSDND NFQLKYVWSS DTKEKHIVFG AEKQLKKAIK EAFKEFPEIK RMFVYTTCTT ALIGDDPKAV CREVEEELGD VDIFVVECPG FAGVSQSKGH HELNIGWMRD KIGTLEPEIK SEYTINVIGD YNIQGDTYVL QKYFDKMGIQ VIAHFTGNVT YDQLRCMHRA KLNVVNCARS AGYIANELKR VYDIPRMDVD TWGFEYVKVA LRKIGAFFGL EDKAEEVIAE EVAKYEGKLN WYKERLKGKK VCIWTGGPRL WHWTKALEDD LGMEVVAMSS KFGHQEDFEK VIARGRVGTI YIDDGNELEF FEVLDNIHAD IIFTGPRVGD LVKKLHIPYI NGHAYHNGPY MGFEGAVNMA RDMYNGIYSP MWSLAGKDPR VVQEL
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