Gene Mbar_A2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2271 
Symbol 
ID3624922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2880683 
End bp2881864 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content39% 
IMG OID637701144 
Productiron(III) ABC transporter, solute-binding protein 
Protein accessionYP_305776 
Protein GI73669761 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.79737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.104601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAA AATCAATAGT TATTCTATTT GTTGCAATCA CGACAGTATT AGTTTTCACC 
GGCTGCACGG GAGAAAAAAT CAGTCAGGTG GCACAGGATA ATACTACAGG AGTATCCACT
TCAAACGATA AAAATGTGGA AAATGCGACA CACGTATCCA CTTCAAACGA TAAAAATGTG
GAAAATGCAA CAAACGTATC CACTTCAAAT GATAACAGTG GGGAAACTAG AATTGTTACT
GATTCGGCAG GCAGACAAGT AACAGTTCCT TTAAAAGTGG AAAGAGTTGC AGATACCTGG
ATGGGACATA ATGAAGTGCT GGCTATGCTT GGAGCTGATG ACAGGCTTGT TGCAACTATG
TTCAGCTCCA AAAAAAGACC ATGGGCGTAT AAAGTTTGCC CTGCCTATTA TAACGCTGTA
ACACTCAGCC CAACATATGA TGTGGAAGCT TTGCTTGCTA CCAAGCCAGA TGTTGTTTTC
ATGCCAAGCA GAGATAAAAA TATCGAGAAA GTATCTGCTC TTGGGGTTCC TGTTGTAGAG
GTAAGTTTTA CAGATTTTGA TTCTATGAAA AAATGTTTTT CAGACACTGC GAATGCTTTG
GGAGACGAAG AGGCTTTAGA ACGTTCACAG ATATATAATG CATATCTGGA TAGCAAATTA
GAGTCGGTAA GAAATATTTC ATCCAGAATA CCTTACGACG AAAGGCCAAA AGTTCTCCAT
CTCGTATCAC TGTCACCTTT GTGCGTAGAT GGTGGCGGAA ATATCATCAG TGATTGGATT
GAAGCTGCAG GAGGTATCAA TGCTGCTGAA GAAGTAAAAG GTGGTATTAT GCAGGAAGTT
TCAATGGAAC AAATCTTGAA GTGGAATCCT GATGTAATTA TTCTTAGTGT GAACGCCAAA
TCTGAAGAAA AAGAGAAGAT AATGAATAGC ACGTCATGGA AGAAGGTTAA AGCAGTTCAA
AATAACAAGG TGTTTGTAAA TCCAGAAGGA GCGTTCATAT GGAGTCGAGC TGGAGCAGAA
CAAGCTCTTC AGATTCAATG GGCTGCAAAA ACCATTAATC CAGATATGTT TCAATCCATT
GATATAAATA ATGAAACAAA ATGGTTTTAC AAGACCTTTT TTGATTATGA GCTTACAGAT
GAGGATGTTC AAAAAATTTT GAATGCACAG GCTCCAGATT AA
 
Protein sequence
MNKKSIVILF VAITTVLVFT GCTGEKISQV AQDNTTGVST SNDKNVENAT HVSTSNDKNV 
ENATNVSTSN DNSGETRIVT DSAGRQVTVP LKVERVADTW MGHNEVLAML GADDRLVATM
FSSKKRPWAY KVCPAYYNAV TLSPTYDVEA LLATKPDVVF MPSRDKNIEK VSALGVPVVE
VSFTDFDSMK KCFSDTANAL GDEEALERSQ IYNAYLDSKL ESVRNISSRI PYDERPKVLH
LVSLSPLCVD GGGNIISDWI EAAGGINAAE EVKGGIMQEV SMEQILKWNP DVIILSVNAK
SEEKEKIMNS TSWKKVKAVQ NNKVFVNPEG AFIWSRAGAE QALQIQWAAK TINPDMFQSI
DINNETKWFY KTFFDYELTD EDVQKILNAQ APD