Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2270 |
Symbol | |
ID | 3624921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2880011 |
End bp | 2880502 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637701143 |
Product | 3-isopropylmalate dehydratase |
Protein accession | YP_305775 |
Protein GI | 73669760 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.310524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0869974 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTCTTA TTATAGGCCG AGTCTGGAAA TTCGGAGACA ACGTTAATAC TGATGAAATA ATCCCGGGTA AGTATTTGCG GAGCAAAGAT GTACAGATCT TTGCAGCTCA TGCAATGGAG GGAATTAACC CGGAATTCAC AAAAAAGTTC AGGTTTGGAG ATATCATTGT TGCAGGCACT AACTTCGGCT GTGGGTCTTC AAGAGAGCAG GCTCCTCTTG CTTTGAAATA TGCAGGAGTA TCATGTGTTA TAGCAAAGTC TTTTGCAAGG ATCTTTTTCA GAAATGCAAT CAATATCGGG CTACCTCTCA TAGAAGTTGA TATTGAGTGT CAGGAAGGAG ATAAAGTTAA AGTTGATCTG GCCAAAGGTG AAGTTATAAT CTCAGAGAAA GGCACGTTCA AGGGAAATAA ACTGCCGGAT TTCCTGCTTG AGATACTTAA TGATGGTGGG CTTGTAGCTC ATAGAAAAAA AGTAAATAAA GAGCAAAATT AA
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Protein sequence | MSLIIGRVWK FGDNVNTDEI IPGKYLRSKD VQIFAAHAME GINPEFTKKF RFGDIIVAGT NFGCGSSREQ APLALKYAGV SCVIAKSFAR IFFRNAINIG LPLIEVDIEC QEGDKVKVDL AKGEVIISEK GTFKGNKLPD FLLEILNDGG LVAHRKKVNK EQN
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