Gene Mbar_A2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2260 
Symbol 
ID3624911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2868913 
End bp2870049 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content40% 
IMG OID637701133 
Producthypothetical protein 
Protein accessionYP_305765 
Protein GI73669750 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.032453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACAA CAAAAAGTCC ACTAAGTTTG TTAATCGTGC TGTGTCTGTT AATAACACTA 
TCTATACTGC TTATAAGTGG ATGCTCACAG AAAACAAGCG ATGTTATGGA AACAACATCA
AATCCCAATG CTGAGATGGC TGCTGCAGCA AATACGGATC AGGAAACAAC AATGTCGGAT
ACTGTAGTGT CAGATACTCG GGTAATTACC GATTTAGCAG GTAGAAAAAT CACTTTGCCT
GCTGATATTA CCAGGATTTC AGTGTTACAT CCGATACCGT GCCAAATGGT ATGGAGGCTG
GCGCCGGAAA AGCTTGTGAG TGCGGACAAG CAGTTTACTG AACGACTAGA ATTTATGTCA
ACTGATGAAG AAAAGAGGCT GCTGGCTCTT CCGATTAATG GAGAATTCCA CAGTGACATG
AACATAGAAG ATCTTTTGGC AGTCAGTCCA CAAGTAGTAA TAACGTTAAC AAAGGATACG
AAAATTGAAT CAGAACAAAA AAAAGTTGGC ATTCCATTCA TTGCTGCGTC AAAAGATACG
CTTGAAGAGA TTGCAGATTC ATGGAGATTA ATCGGTAAAA TTGTTGGAAA TGAAAAAGAA
GGAAACGAGC TTGGGGATTA CTGGGATGAA ACCATCAAAA AGGTTACCGA TCAAACCTCG
AAAATTAAAG AAAGTGATAA GCTCAAAGTA TATTATGCGC AGCCAGATGT CACCAAGACG
GTTGGGTCCA GAACCATTAT GGCGTCTATC ATCAGTTTGG CGGGAGGCAT AAGCTTCATG
GAAGCAAATC CGCAAATGGA ATCGGCCAAT ACAAGTGAAG AAATCCAGGT CTCGCTGGAA
CAAATCTATC AGTGGAATCC AGATGTTATT ATTACTAAAA CTGCGAAAGG TCGTGATGAA
ATTCTCTCGA AAGACGCCTG GAAAGATATT GCTGCCGTAA AGAATAAGCG CGTTTACGCA
TCTACAAAAT ACGAGATGCT TGACCGGACA CAATCGCTGA TGGGACTTTT GTGGACCGCG
AAAGTGCTTT ATCCGGATAA AGTGAAAATT GACCTGGACA AAGAGGTAAA AACATTTTAT
TCAAAAGTAT ATCTTGATAA TAACGTGACT AATGATCAAA TCAGTCAGAC AAATTAA
 
Protein sequence
MRTTKSPLSL LIVLCLLITL SILLISGCSQ KTSDVMETTS NPNAEMAAAA NTDQETTMSD 
TVVSDTRVIT DLAGRKITLP ADITRISVLH PIPCQMVWRL APEKLVSADK QFTERLEFMS
TDEEKRLLAL PINGEFHSDM NIEDLLAVSP QVVITLTKDT KIESEQKKVG IPFIAASKDT
LEEIADSWRL IGKIVGNEKE GNELGDYWDE TIKKVTDQTS KIKESDKLKV YYAQPDVTKT
VGSRTIMASI ISLAGGISFM EANPQMESAN TSEEIQVSLE QIYQWNPDVI ITKTAKGRDE
ILSKDAWKDI AAVKNKRVYA STKYEMLDRT QSLMGLLWTA KVLYPDKVKI DLDKEVKTFY
SKVYLDNNVT NDQISQTN