Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2165 |
Symbol | |
ID | 3626022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2739467 |
End bp | 2740342 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637701040 |
Product | hypothetical protein |
Protein accession | YP_305673 |
Protein GI | 73669658 |
COG category | [K] Transcription |
COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.758559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTTA CTCCGATTCA AAAAGACATT ATTATTGCAT TAATCAACCT TCAGCGGCAA AAGGACCGGG CAATCAAGGG AGAAGAAATA GCCGAGGTAA TCAAGCGTAA TCCTGGAACT ATCCGCAATC AGATGCAGTT ATTAAAGGCT CTTGGGCTTG TAGAGGGAGT GCCTGGGCCA AAAGGAGGCT ATAAGCCCAC AGGAGCAGCA TATGATGCAT TAAGAATCCA ACAACTGAAA AATGAGTCTG TAGTTCCCCT TTACAGAAAT AATGCGTTAG TTAATGGAGC TACAGCTGCC GATATTAGTT TTACCACGGT CAGGAGTCCT GATGCCTGTA GCGGAGTCGT CCGTGTAATT GGAAACACAA AAGATTTCAT AATGGACGAT AAGCTTCAGG TAGGCCCCAC ACCTGTAAAC CGCCTGATAA TCCGTGGAGA AGTCACCGGA AGGGATGACA CTAATAATTC AATTCTGTTC AATATTACGG AAATGATTTC ACTCCCTAAA AAACATGTCA AACATTATAT GAAGTATCCT CCTTTGCTTG TAAATCTCAA TGCGAGTATC CAGGAAGCAA CGAGGCTTTT TATCCGGAAT AACGTTCATG GAGCTCCTGT AGACGATAAA GGAAAAATCA TAGGAATCGT TACCTACACC GATATTGCCC ATGCTATTGC TCAGGGAAAA CCAAACGTAA AAGTTAAAGA TATCATGACA AAAGAACTTA TCACGGTTGA TGGGGATATG CAGCTCTATG ACGTTGTAAA ATTATTCCAT AAATATAACG TAGGCAGGCT CATCGTAACC ATTAATGGCG TGCCCAAAGG CACACTGTCA AAAACCGATG TCCTGAATGA ACTGGCAGTG TATTAA
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Protein sequence | MELTPIQKDI IIALINLQRQ KDRAIKGEEI AEVIKRNPGT IRNQMQLLKA LGLVEGVPGP KGGYKPTGAA YDALRIQQLK NESVVPLYRN NALVNGATAA DISFTTVRSP DACSGVVRVI GNTKDFIMDD KLQVGPTPVN RLIIRGEVTG RDDTNNSILF NITEMISLPK KHVKHYMKYP PLLVNLNASI QEATRLFIRN NVHGAPVDDK GKIIGIVTYT DIAHAIAQGK PNVKVKDIMT KELITVDGDM QLYDVVKLFH KYNVGRLIVT INGVPKGTLS KTDVLNELAV Y
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