Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A2139 |
Symbol | |
ID | 3626093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2701180 |
End bp | 2702628 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637701015 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_305648 |
Protein GI | 73669633 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00876576 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.418146 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCAGAAC TCCAAAAATT TACATCTGAT GTTGGTGTTA CATTTATAGC TTCTGCTATA GGTATGCTTT TAGGATTTCC TATAACCGTA CTCTTGGGAC GATATTTAGG AGCCGATGAT CTGGGTCTTT ATCGAATGGT GAACACCATC TTTGGAAGTC TTATGCTGTT TGTCACTATT GGAGTTCCTG CAGCTATTAT AAAATATGTG GCTGAATTTC GTGACAACGA AGAAAAAATA GCACAAATTG TGTCTGCAGG TTTAATCACA TCTGTTTTAT TGGGATTATT TTCTTTCATA TTTATTTATC TGAGTACAAA TTTATTCGCG AAATTATTTA ACATGCCTGA ACTTTCAGGC CTATTGAAAA TTCTTGCTTT TGCGTTTCCA TTTTCTATTA TTAATAGTAC ACTTCTTGGT CTTCTCAATG GCTTGAGAGA AATGACTAAA AACGCATGGG CCACCATAGT TCAGAGTACA TTTTTACTAA TTTTTACTTT TCTCCTAGTT TTTAAGTACG GCGTCAATGG CGCAGTTACT GGGATCGTAC TCTCATCTGC TCTGACAACA CTGCTTTTGA TATCTGTTCA AAAGATTTCC AAGATAACAT TTTCCAATTT GTATGGAGCA GTTGTTCAGA TTATTGATTT TGGTTCAAAA ACAGTGCTTG CAAATGCAAT AAATCTTATT AATTACCAGG CAGATATCCT GATGATTGGG TACTTTATGA CCAAAACAGA TGTTGGAGTT TATAGCGTTG CAGTTATGTT TGCAAAGCTT ATCTGGATTT TTCCCGATTC ACTTCAGAAA ATTACTTTCC CTCTTATCTC TGAATACCAT GCAAAAAAAA TGAGCGATTC AATAACAACT GTAGTTGACA GATGTATGAA ATATAGTTGT CTTTTTTTGA CTTTTTTCAC TACTTTTTTT ATTTTTTTCG GAGAAAAGGT TGTAGCTCTC ATCTTTGGAG CTGAATTTGA ACTCTCATAC ATTCCATTAA TCATTTTGCT CATTGGAACT CTTTTTTATG GAATAACTAA ATCTGTAGGG TCTATTTTTG CAAGCATTGG AAAAGTTAAT CTTGTCTACA AAATTCCTTT GGTTTCAGCA ACATTTAACA TTATTATTAA TATAGTCTTG ATCCCAACTT ATGGTATCAA TGGAGGAGCC CTTGCAACAA GTTTTTCTCT GATTATCAGT ATGATTCTAA TGCTTCATTT TATGAAGTCC CTTTTAGAGA TTAAGTTTGA CTTCTGGTGG TATTTTAAAA TCTTTGGTAT TACAATGTTT TTAATTCTTG TCTACCTAAT AATAGTAAAC AAGTATAACA TATTACTTGG ATTAGTTTTA ATGGCTTTAC AATATGTTAT ATTTTTCAGA TTTTTTATCC CAGTTGAGGA TAAACAAATA TTATATAAAG TAATTTCTAC CAATGGGAGA AATTATTAA
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Protein sequence | MSELQKFTSD VGVTFIASAI GMLLGFPITV LLGRYLGADD LGLYRMVNTI FGSLMLFVTI GVPAAIIKYV AEFRDNEEKI AQIVSAGLIT SVLLGLFSFI FIYLSTNLFA KLFNMPELSG LLKILAFAFP FSIINSTLLG LLNGLREMTK NAWATIVQST FLLIFTFLLV FKYGVNGAVT GIVLSSALTT LLLISVQKIS KITFSNLYGA VVQIIDFGSK TVLANAINLI NYQADILMIG YFMTKTDVGV YSVAVMFAKL IWIFPDSLQK ITFPLISEYH AKKMSDSITT VVDRCMKYSC LFLTFFTTFF IFFGEKVVAL IFGAEFELSY IPLIILLIGT LFYGITKSVG SIFASIGKVN LVYKIPLVSA TFNIIINIVL IPTYGINGGA LATSFSLIIS MILMLHFMKS LLEIKFDFWW YFKIFGITMF LILVYLIIVN KYNILLGLVL MALQYVIFFR FFIPVEDKQI LYKVISTNGR NY
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