Gene Mbar_A2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A2090 
Symbol 
ID3625705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2641044 
End bp2641949 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content39% 
IMG OID637700966 
Producthypothetical protein 
Protein accessionYP_305601 
Protein GI73669586 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG AGACAATAAT GAAACAGGTA ATTCCATATA CCGAGATAAC GGTATCCAGG 
CTGATTTTTG CAGTAATAAT GCTTTTTATG GGGTTCATTT TATCAAAGTA TATTATTCTT
GTTTTCAGAA GAGGAATACA GAAAACAAAG ATTCCGGATC TTACTGTTCA ATTTCTCACC
CATTTTTTAA GTATCATCCT TTATGTAATT GTTATTCTTA TTTTCTTGAA GAGTCTGAAT
TTCGACGTGG ATAGTTATAT AGTAGGAGTT TCTGCAGCAA TAGGCATTGT TCTCGGACTT
GGTCTGCAGG ATACCTTTAC AAACCTGACT GCTGGAGTAT GTGTTGCCGC AATCAGGCCT
ATTGACACGG GAGAAATGGT AACCGTAAAC GGACAGACCG GAAAAGTAAG ATCTGTAGGG
ATCATGTCAA CCGAGCTCCT GACTCTTGAC AACCAGCTCA TAACAATCCC TAACAAGCTT
GTATGGGGAA GTTCTATTGT TAATATGACA CGGATGCCTA CAAGAAGAGT GTCGGTTGAT
GTAGGAATAA GTTACTCCTC AAGCCTCGAA AAAGCTACAG AGATAGCACT CAATATAATG
AAAACACACC CTCTTGTCCT TAAGGAACCT GAACCCGCAG TTGTAACCAC TGAACTTGCC
AACTCCTCGA TAAATTTACA GCTCCGGGCC TGGGCAAAAA CGGGAGAAAT GGTAACCGTA
AAGAATGACC TTGTTGCAGG AATATTTGAC GCTTATACGA AAGAAGGAAT TGAAATTCCG
TTCCCTCAGA TGGATATAAA TATAAAAGAA ATTAAACCAA AAGAAGGTGG AAAACACACA
ATGGAACAGG ATATGACAGT GCAGGAAGAA AAAATTTTAC TTGAAGAGAA GTGCAATGTG
GAATGA
 
Protein sequence
MSFETIMKQV IPYTEITVSR LIFAVIMLFM GFILSKYIIL VFRRGIQKTK IPDLTVQFLT 
HFLSIILYVI VILIFLKSLN FDVDSYIVGV SAAIGIVLGL GLQDTFTNLT AGVCVAAIRP
IDTGEMVTVN GQTGKVRSVG IMSTELLTLD NQLITIPNKL VWGSSIVNMT RMPTRRVSVD
VGISYSSSLE KATEIALNIM KTHPLVLKEP EPAVVTTELA NSSINLQLRA WAKTGEMVTV
KNDLVAGIFD AYTKEGIEIP FPQMDINIKE IKPKEGGKHT MEQDMTVQEE KILLEEKCNV
E