| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1989 |
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| Symbol | |
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| ID | 3627964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2484625 |
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| End bp | 2488350 |
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| Gene Length | 3726 bp |
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| Protein Length | 1241 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637700867 |
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| Product | cell surface protein |
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| Protein accession | YP_305503 |
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| Protein GI | 73669488 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.565549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA ACACATTGAA AATATTTATT ATTTGTTTAT TATTGTTCCT GGTGACGGCT
ACTATGCCAG CACTGGGCTC AGACTGGACA CAGTTCCAGA AAGATGTATA CCATGCAGGT
GTAACTACGG ACAGGGCACC CATAACTGAC CCAACAGACT ACTTGCTTTC CTGGAATTAT
AGCCTTGGAG GGAACATCGA TTCGGCTCCT CTAGTGGCAG GAGAAATGAT GTATGTTTTG
GCGGGTAACA ACCACATATA TGCGTTTGAC AGGACCACAG GCTCACTTGC TTGGGAACAG
AGTACAAGTG GAAGTGCTGG CTTCACTATC GGAAGTGCGG CAGTTGGAAA CGGAATAATC
TTTGTGCCTA CCTCTGATGG AAAGATTTTT GCTTTTGATG CGAAAACAGG AACCTTGAAA
TGGAATAAGA CTGTAGGCAG CGGTAAGCAA CTTGACACCC CGATTACTTA TTCTGAAGGC
AAAATATATT TCGGAGAAGC AATGGGCGGG CACAAATATT ACTGCTATGA CGAAGAAGGC
AACGAAATAT GGAGCAGAAC ATCTACCACT CAGACAAGCA CTCAGGGATC TTACTACTGG
GCAGGAGCTG CGGTAATCGG GGACAACCTC ATTTATGGAG ACGATGATGG ACACATTATT
TCCGTAAATA AGGACACAGG AGCTGACATC TCCGAAATAG ATGTTTCTGA AGAGTTCGGG
GTAACATGTG GGAAAATCAG ATCATCAGTA CTATACGTTG AAGAATTAAA AAGGATCTAC
TTCACGTCCA CAGGAGGATA TTGTTTCGCT ATTGGGTTTA ACCCAGCAGA CGGAACATTT
AATACCAACG ATAAACACAG CGAAAAAGTT TGGTACTCCA CCACCACACC TACCTACTAT
AAAGGAAGAA TCTACATAGG TACAGGTGCT CAAATGTACA GTGCAGGAAA AGGAGTTTAC
TGCCTTGACT CCGACCTGAG TGGTGTGATC TGGAATTATC CAGCAAATGT AGTCCAATCT
TCCCCAGCCC TCTCAACCTA CTATGATGAC GGGGACGGGG AGGTATATAT ATACTTCACA
GTAAACAACG CTACAGGCGG TGTGTACTGC CTAAAGGACT TAGCAGGTTC CACAAGCCCG
GAACTTGTAT GGAGTTACAA AGATGCAAAA AAGACACAGT ATTCTCTTCA GGGAGTTGCA
ATATCGGACG GCTGGATATA TTTTGGAGCG GATAAAAAAT ACGTTTTTGG GTTAACTACT
AAAGATTCGC AAGCGTCCAC GGCACCGAGT GCTAGTTTCA GCGGATCCCC ACTTTCCGGA
AACTCACCTC TTGAAGTTCA GTTCACAGAC AAATCTACAG GTGCTCCGAC ATCCTGGGCA
TGGGATTTTG ACAACGATGG AACGGTCGAC AGCAAGGAGC AGAATCCTAG CTATATTTAC
AATGACACAG GCAGTTACAC TGTCAAACTG ACCGTCAGCA ATGGAAACGG TAGTGATGCC
AAGGAAATCC AGGACATGAT CAAAGTCACT GAGGAGGAAC AGGAACAGCC GGTAACCTCT
GAGGGCTGGT ACCAGTTCCA CAAGGATGCC CAGCACAGCG GGTATACAAG CTCCACTGCT
CCGGACAGCG CTAACCTTGC CTGGACTGCC GAACCTCTTA ATGATACGTA TTCCCTTGTT
CCGAGTTCAA GCGTGGCTAT TGCTGAAGGA AAAGTCTTTT GCCTCTGCAA CGGACCAACT
GACGAATATG GCAACCCTCT AACTTCATAC GGACAGCTTG TGGCTTTTGA CGAGAATACG
GGACAAGAAG TATGGAATGT GACGGTTGAG GCTCCCGAAT GGGGTTCATG GTCTTCTCCT
GCATATGATT CAGGAAAAGT TTTCGCATCT GCAGGCAAAC AGACATACTG CATAAACGCT
TCAACCGGAG AAGTCATCTG GACTTTCCAT AACCCAACAG ACCTTGCTTC CTGCGACGGT
GGACCTTCAA TTGGAGATGG AAAAGTCTTT GTAAGTGACT GGGACGGAGG AAATTACTAC
TGCCTTGACG AAAGTAACGG AGGGCTCCTG TGGACTTTCA AAGTAGACGG AGCCTATGCA
CAGGGCACTC CTGCTTACAA AGACGGCAAA GTGTACCTGA CGTGCTGGAG TTCCACAAAC
GCAGTCTACT GTGTAAATGC CGAAACAGGA GAAACGATCT GGAAAAATGA CGGGTTTGAA
AACGGCCCAT GCGGCTCCGT AACAATTACT GATGAGGGGC TGTACGTTAC TGTATTCGGT
TTTGGTACCT CGGACGGAAT TTACAAGCTT GACCTGACAG ACGGAAGTGT TCTCTGGGGA
AGGTCAGATG TATCTCCTTC AGATTCGACA CCAACAGTAT TAGAAGGGAA AGTATATTTG
TCGACAGGAA CTTCAGGATA CAGTGAACTA AAGACATATT GCCTTGATGC TTCCGATGGA
CAGAGCCTAT GGGAAACAAA CGCTTCTGAC AATATCGGAG ACTGGGCCTG TTCTGTAGCT
GTTGCGGATG GAAAAGTATT TACTGGCGGG GCTGCTTCCG GACTCTTTAC TGGCTCTTCA
ACACTCTACG CATTTGATGC TGAAACAGGC TCACAGGTCT GGAGTTACGA GGGTTGCGGT
TGCTCCCCGG CAATTGCCGA TGGAATGGTC TTCAGCATTG GAAGCGGGAA AATATACGCT
TTCAAGGAAA CTCAAGGATC TCTCCTCGAA GCAAAATTCA GCTCGAATGT GAGTACAGGA
AAAGCTCCCC TGACTGTAAG CTTCACTGAT GAGTCCACTG GAGAAGGCAT AACTTCCTGG
GACTGGGATT TTGACAACGA TGGAGCTATC GACAGCACAG AGCAGAATCC AGTCCACAAA
TACACGGCAG CTGGTACCTA CACTGTTAAC CTTACGGTTT CCAACGAGGA GGGAAGCGAT
TCGGAGGTAA AAGCTGGGTA CATTAAGGTC TCCAGTCAAT CTTCAGCAAA GCCAGTAGCT
GCATTTACTG CGTCGCCTAC TTCAGGAAAA ACACCATTAA ACGTTGCCTT TACTGATACA
AGCACTGGCT CCCCAACTTC CTGGTTCTGG AAATTTGGAG ATGGATCAAA GTCATTCCTA
CAGAATCCGA TTCACAAGTA TTCAAAGGCA GGAATATATA CTGTTAACTT GACAGTAAAG
AATGCTAAAG GCAAGAACAC GGTAACAAAA ACACAATATA TAAAAGTGAT AACAAAACCT
GTGGCAAACT TCAACAGCAG TGTTACATCA GGAAAAACAC CATTAACGGT TAAATTTACT
GACACAAGCA CAGGGACACC TGCTAAATGG AGATGGGACT TTGGAGACGG ATCAAAGTCA
TTCCTACAGA ATCCGGTTCA CAAGTATTCA AAGGCAGGAA CATATACTGT TAATTTAACA
GTAAAGAATA CTAAAGGCAG CAATACGGTA ACAAAAACAG AATATATAAA AGTGATAACA
AAACCGGTTG CAAACTTCAC CAGCAGTGTT ACATCGGGAA AAGCACCATT AAAGGTTAAA
TTTACTGACA CAAGCACAGG AACACCTGCT AAATGGAGAT GGGACTTTGG AGATGGATCA
GATTCATTCC ACCAGAATCC GATTCACAAG TATTCAAAGG CAGGAACATA TACAGTTAAC
TTAACAGTAA AGAATGCAGC AGGACGTAAC ACGGTAACAA AAACAGAATA TATAAAAATT
ACATAA
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| Protein sequence | MNKNTLKIFI ICLLLFLVTA TMPALGSDWT QFQKDVYHAG VTTDRAPITD PTDYLLSWNY
SLGGNIDSAP LVAGEMMYVL AGNNHIYAFD RTTGSLAWEQ STSGSAGFTI GSAAVGNGII
FVPTSDGKIF AFDAKTGTLK WNKTVGSGKQ LDTPITYSEG KIYFGEAMGG HKYYCYDEEG
NEIWSRTSTT QTSTQGSYYW AGAAVIGDNL IYGDDDGHII SVNKDTGADI SEIDVSEEFG
VTCGKIRSSV LYVEELKRIY FTSTGGYCFA IGFNPADGTF NTNDKHSEKV WYSTTTPTYY
KGRIYIGTGA QMYSAGKGVY CLDSDLSGVI WNYPANVVQS SPALSTYYDD GDGEVYIYFT
VNNATGGVYC LKDLAGSTSP ELVWSYKDAK KTQYSLQGVA ISDGWIYFGA DKKYVFGLTT
KDSQASTAPS ASFSGSPLSG NSPLEVQFTD KSTGAPTSWA WDFDNDGTVD SKEQNPSYIY
NDTGSYTVKL TVSNGNGSDA KEIQDMIKVT EEEQEQPVTS EGWYQFHKDA QHSGYTSSTA
PDSANLAWTA EPLNDTYSLV PSSSVAIAEG KVFCLCNGPT DEYGNPLTSY GQLVAFDENT
GQEVWNVTVE APEWGSWSSP AYDSGKVFAS AGKQTYCINA STGEVIWTFH NPTDLASCDG
GPSIGDGKVF VSDWDGGNYY CLDESNGGLL WTFKVDGAYA QGTPAYKDGK VYLTCWSSTN
AVYCVNAETG ETIWKNDGFE NGPCGSVTIT DEGLYVTVFG FGTSDGIYKL DLTDGSVLWG
RSDVSPSDST PTVLEGKVYL STGTSGYSEL KTYCLDASDG QSLWETNASD NIGDWACSVA
VADGKVFTGG AASGLFTGSS TLYAFDAETG SQVWSYEGCG CSPAIADGMV FSIGSGKIYA
FKETQGSLLE AKFSSNVSTG KAPLTVSFTD ESTGEGITSW DWDFDNDGAI DSTEQNPVHK
YTAAGTYTVN LTVSNEEGSD SEVKAGYIKV SSQSSAKPVA AFTASPTSGK TPLNVAFTDT
STGSPTSWFW KFGDGSKSFL QNPIHKYSKA GIYTVNLTVK NAKGKNTVTK TQYIKVITKP
VANFNSSVTS GKTPLTVKFT DTSTGTPAKW RWDFGDGSKS FLQNPVHKYS KAGTYTVNLT
VKNTKGSNTV TKTEYIKVIT KPVANFTSSV TSGKAPLKVK FTDTSTGTPA KWRWDFGDGS
DSFHQNPIHK YSKAGTYTVN LTVKNAAGRN TVTKTEYIKI T
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