| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1924 |
|---|
| Symbol | |
|---|
| ID | 3626237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2402601 |
|---|
| End bp | 2403542 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637700805 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305444 |
|---|
| Protein GI | 73669429 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1665] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.618938 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA CACGCTTGAG GGATTTTCTT GTCACGAAAG ATAACTGGCT TTTTGCGGTT
TCCGACTATT TCCGTAGCGA TGGAATCCGT GCCACACTCC GCTACGTGCC CGATGAGAAA
GGGGAAAGGG AGTTAAACGG AATACGATAT AAAAAATATG ATTTTGGTCC GGCTTTTGAG
TTCATGAGGA AGCACAGGCC TGAATGGGTT CAGGATGTTC ATGTGGTGCC TGAATCTGAG
GTAAAACAGG TACTTCGCCC CTCGGATGCG ATTCCCAGGC TTGTAAATTC TGACAGCCGC
GTCAGGGCAA TCGTAAAGAC CCTTGACCTA GCAGGCATTC CCAGGACAAG TATGGGAGTT
ACTGGCTCAA TGCTCGCAGG CCTACAGAAT GAGAGCTCGG ATATTGACTT TGTTGTGTAC
GGACCTGCAT GGTTCAGGGC AAGGGATTCA ATAGCTGCTG CAAAACAGCA GGAAGGGCCC
ATTGAAGAAA TTGATGAGGA GATGTGGCAG AGAATCTATA CTAAGAGAAT TCCAGAGATT
TCGTTTGATG AATTCATGCT GCACGAATCG AGAAAAGGTA ACCGTGGCAT GGTCGAAGGC
ACTTATTTTG ACCTTCTTTT CGTAAGGGAA TGGGACCAGA TAAAAGAACC TCTTCTGCGC
GGGAAGGATA CAGTCAAAAT GAAAATCGAA GCCAAAGTTA CAAATGCCGA CTTTGCTTTT
GACAGCCCTG CGTATTACAA GGTAGATCAT GATGAGATCG ACCATGTGCT CTCATATACC
CACACCTATG CAGGCCAGGC ACTTCCAGGA GAGTTAATAG AAGCTTGCGG CATCGTTGAA
GAAGTCGGAG ACATTAAACG GCTTGTTGTG GGCACTTCAA GGGAACCAAA AGGGGAATGG
ATAAAGTCTC TTTCCTGGCT TGAGAGGTGC GGGCATATAT AA
|
|---|
| Protein sequence | MLKTRLRDFL VTKDNWLFAV SDYFRSDGIR ATLRYVPDEK GERELNGIRY KKYDFGPAFE
FMRKHRPEWV QDVHVVPESE VKQVLRPSDA IPRLVNSDSR VRAIVKTLDL AGIPRTSMGV
TGSMLAGLQN ESSDIDFVVY GPAWFRARDS IAAAKQQEGP IEEIDEEMWQ RIYTKRIPEI
SFDEFMLHES RKGNRGMVEG TYFDLLFVRE WDQIKEPLLR GKDTVKMKIE AKVTNADFAF
DSPAYYKVDH DEIDHVLSYT HTYAGQALPG ELIEACGIVE EVGDIKRLVV GTSREPKGEW
IKSLSWLERC GHI
|
|---|
| |