| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1899 |
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| Symbol | |
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| ID | 3624300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 2366157 |
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| End bp | 2367863 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637700780 |
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| Product | DNA ligase (ATP) |
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| Protein accession | YP_305419 |
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| Protein GI | 73669404 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.812103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGTT TCAGGGAATT TGCAGAAACC TGCCAGGCGA TTGAAAAAAT CTCGAGTACA
ATTGATACTA CAAGTCGGGT TGCTGACCTT CTTAAAAAGG TTGATGTTGA AGAGCTGCCC
ATTGCAACTC ATTTTATTAT GAGTGAGGTT TTTCCTGCCT GGAGTGGAGA ACAATTGGGA
ATTGGCACTA GCCTGCTGTA TGTTTCCCTT TCCAAAGCCT CCGGAATGCC AGTAAAAAGT
ATAGAATCTC TTATTCGGAC TACCGGAGAT ATAGGGGACA CAGCCCTTCT GATCCTCAAG
GAGAAAAGGA AAAATCAGGT TACTTTTTCC TCTTTTTTCG AAGAACAGCC CGAACTCTCA
ATAACCGAAG TTTATAACCG TTTTAAAATT GCCTCCGAAG CCTCAGGAAA AGGTTCACAG
GACATTAAGA TAAAGAATCT TCAGTTCCTC TTTACTTCCT CAACTCCAAG GGAAGCAAAA
TATATCTCCA GGCTTGCGCT TGAGGAACTC CGCATAGGCG TCGGAGAAGG CGTTGTAAGA
GATGCAATTG CAAAAGCTTT TTCCGTGCCT GTGGATGTGG TTGAGCACGC CTTTATGGTT
ACGAATGACC TGGGGATAGT CGCTGCAACT GCCAAGGACG GCGGGGTGGA AGCCCTAGAG
AGTCTCGGGA TTGAGATCAA CCGCCCGATC AAGATGATGC TCTCACAGAT CAGCCCTGAC
ATAGTTGCTG ACATAAAGGA AATGAAGGAG GCTGCAATCG AATGGAAATT CGATGGGGCA
AGAGTCCAGG TCCATAAGGC TGGAGATTCG GTTATGCTTT TTTCACGAAA GCTTGAAAAT
GTCACAAATT CCCTCCCTGA CCTTGTAGAG ATAATCCGCA AACATGTAAA GGCCGAATCT
GCAATTCTTG ATGGAGAAGC CGTCGCAGTG GACGAAAATG GAAGGCCCAG GGCATTTCAA
GAGATCCTTA AACGTTTCCG GCGCAAGTAC GATGTGGAAG AAAAAGCCCT TGGCATCCCT
ATTCAGCTAA ACCTTTTTGA CATAATGTAC TTAAACGGAA AAACGCTGAT AGACCTGCCT
CTGATTGAAC GGCGAAAAGC GCTTGAGTCC TGCGTGGAAA GCTCGGTTGA GGATTCAAAG
TCCATCTCCG TGGACAAACA GGTGATAACC GGAGACCTCG ATCTTATAGA GAAGATCTAT
AAGGAGGCTT TAGACGCCGG GCACGAAGGA GTTATGGTCA AAAACCCGAA TTCGTTTTAT
TCCCCTGGCA AACGCGGCAA AAACTGGCTT AAGAAAAAGC CTCTTATGGA AACCCTTGAC
CTTGTAGTTG TTGGAGCCGA ATGGGGATTT GGCAGGCGTG CAAACCTCCT GGGTTCTTAT
ACGGTTGCCT GTTATGACCC AAAAACCCTG CGTTTTCTCC AAGTCGGTAA AGTGGGTACG
GGCCTAACCG ACGATCAGTT AAAGGAACTC ACAGAGATAC TTTCCGGGCT CATGGAAGGT
GGAGAGGCAG GCGGTATATT TGCAATCCGG CCGAAAATAG TCCTTGAAAT CGCCTTTGAG
GAAATCCAGA AAAGCCCCAA TTATGATTCA GGCTTTGCGC TTCGTTTTCC ACGCTTTATC
CGCATCCGGG ACGATAAAGA CCCCGAAGAA GCCGATACGA TACAGAGAAT TGGAAAGGTA
TATAGCCAGC AGTTGAAAAG GTTGTAA
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| Protein sequence | MTSFREFAET CQAIEKISST IDTTSRVADL LKKVDVEELP IATHFIMSEV FPAWSGEQLG
IGTSLLYVSL SKASGMPVKS IESLIRTTGD IGDTALLILK EKRKNQVTFS SFFEEQPELS
ITEVYNRFKI ASEASGKGSQ DIKIKNLQFL FTSSTPREAK YISRLALEEL RIGVGEGVVR
DAIAKAFSVP VDVVEHAFMV TNDLGIVAAT AKDGGVEALE SLGIEINRPI KMMLSQISPD
IVADIKEMKE AAIEWKFDGA RVQVHKAGDS VMLFSRKLEN VTNSLPDLVE IIRKHVKAES
AILDGEAVAV DENGRPRAFQ EILKRFRRKY DVEEKALGIP IQLNLFDIMY LNGKTLIDLP
LIERRKALES CVESSVEDSK SISVDKQVIT GDLDLIEKIY KEALDAGHEG VMVKNPNSFY
SPGKRGKNWL KKKPLMETLD LVVVGAEWGF GRRANLLGSY TVACYDPKTL RFLQVGKVGT
GLTDDQLKEL TEILSGLMEG GEAGGIFAIR PKIVLEIAFE EIQKSPNYDS GFALRFPRFI
RIRDDKDPEE ADTIQRIGKV YSQQLKRL
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