| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1862 |
|---|
| Symbol | |
|---|
| ID | 3624564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 2325626 |
|---|
| End bp | 2326858 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637700743 |
|---|
| Product | S-adenosylmethionine synthetase |
|---|
| Protein accession | YP_305382 |
|---|
| Protein GI | 73669367 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1812] Archaeal S-adenosylmethionine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.238805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGAAATA TAGTCATAGA TGAACTAAAA GCATCTGAAG TTTACCGCCA GAGAGTTGAG
GTTGTAGAAA GAAAAGGGTT GGGGCATCCG GACTATATCT GTGATGCCAT AATGGAACAA
ATTTCAGTAA AGCTGAGCCA GAAGTACCTT GAGACTTTCG GGAGTATCCT GCACTATAAT
ATAGACAAAG GCATGCTTGT TGCGGGGAAA GTGGAGGGAA GACTGGGAGG AGGCAGAGTT
GTAAGCCCTA TGAGACTTAT CATCGGGGAC AGGGCTACTT TTGAAGCGCA GGGGATAGAA
ATCGATGTTC CTGCGCTTGC GGTCAATACG GCGCAGCAAT GGCTCCGGGA TAATATCCGC
TTTGTGGACC CTGAAAATCT AATATACCAG ATCGAGCTAA AAAGAGGTTC TGCAGAACTT
ACGGATATTT TTAGAAGGGG AGAAAAGATC CTCGGGGCAA ACGACACTTC TGCAGCAGTT
GGATATGCCC CTCTCAGCCC CACTGAGAAG CTTGTTTTCG AATGCGAACG ATACCTGAAC
TCCAGAAAGT TCAAAAAAGA ATATCCGGAA TCAGGAGAGG ACGTAAAAGT TATGGGGCTC
AGGCATAGGG AAGATATGCA CCTGACCGTT GCAATGCCGC TTGTTGATAG GTTTGTCGAG
TCAGAAGAAG CATACTTTAA AAAGAAAATC GAGTTGCACA ACCGAATAGA GGAATTTACT
GCCGGGTTTG CAGAAAAAGC AAGGTCTGAA TTTGAGGGCT GCATGTGTCT GAAACCGACA
GTTTCTCTTA ATACTCTGGA CATTCCGGGC AGGGGGCTGC AGGGGATTTA TACCACGGTA
ACCGGTACTT CTGCGGAAGA TGCAGATGGC GGGCAGGTCG GGCGTGGAAA CCGCGTAAAC
GGAATAATCC CGCTAAATCG TCCTGTTAGC AGTGAAGCTG CCGCAGGTAA AAATCCTGTA
AGCCATACAG GAAAGGTTTA CAACCTTCTT TCCCACAGGA TTGCAGCGCG GATCTATAGT
GAGGTGCCTG ATATCTCCGA AGTTTATGTC TGGCTTTTGA GTGAAATCGG AACTCCAATC
GACCAGCCTC AGATTGCAAC TGCCCAGCTC ATAATGAAGA AAGGGTCTGC AAGTGAAGTA
GAAAAAGAAG TGGCTGAGGT AATGGAAAAA GAACTTGAGA ATATACAGGC CTTCTCCATG
GAACTTGTTG CAGGAAAATG TCCTGTATGC TGA
|
|---|
| Protein sequence | MRNIVIDELK ASEVYRQRVE VVERKGLGHP DYICDAIMEQ ISVKLSQKYL ETFGSILHYN
IDKGMLVAGK VEGRLGGGRV VSPMRLIIGD RATFEAQGIE IDVPALAVNT AQQWLRDNIR
FVDPENLIYQ IELKRGSAEL TDIFRRGEKI LGANDTSAAV GYAPLSPTEK LVFECERYLN
SRKFKKEYPE SGEDVKVMGL RHREDMHLTV AMPLVDRFVE SEEAYFKKKI ELHNRIEEFT
AGFAEKARSE FEGCMCLKPT VSLNTLDIPG RGLQGIYTTV TGTSAEDADG GQVGRGNRVN
GIIPLNRPVS SEAAAGKNPV SHTGKVYNLL SHRIAARIYS EVPDISEVYV WLLSEIGTPI
DQPQIATAQL IMKKGSASEV EKEVAEVMEK ELENIQAFSM ELVAGKCPVC
|
|---|
| |