Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1799 |
Symbol | |
ID | 3625161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 2234759 |
End bp | 2236666 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637700681 |
Product | hypothetical protein |
Protein accession | YP_305320 |
Protein GI | 73669305 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAT TGAAAATATT AATGGTTTGT TTAACCTTGC TCCTGGTGGC GGCTGTTCTG CCGGCGCTGG GTTCAGACTG GCCTCAGTTC CAAAAAGACA AAGTACACAG CGGAGTTACA GGCGACAGCG CTCCGATAGC CGACCCTAAC TCAACTATAT CCTGGCAACA TGATCACCCT GTTCCTTCCG GAGGTATGGG CGGGATTGAC GAGAGTCCAA TTGTGTATAA TGGCTCCGTA TATGCCGTTA TAGCAGGAGG CAATCTTACT AAATATTCTC TGGATGGAAC GGCAGCCGGA GGAAACTGGC CGGTTAGCTT TGTCACCAAC CCTGATGATC TTGATTTTCA GCTTGCTACA CCGGCAGCTA GTAATGGGCA TATTTTTGTG GTAGATACCG GATACAACAG GTCTCTAGAT TATGACCTCT ATGCTATCGA TGCAACTACC GGAAGTGTAT CTGGAAGGGT GCATGTAAAT AACTCTACAG GCATTCAGTT TCTTACCCCA GTTACCTATG TAGAAGCCAG CAATGGGAGT AAATACGTTT TATTCGGTTC GGGGAACATG AGTGGCTGGA CAATGCATGA AGGAGAGTAC TACTGTTACA ATGTCACTGA CCCCGCCAAT ATGGAGATAT GTTGGAATTA TTCATCCCCA ACAGGGCATT ACTGGGCAGG TGCAGCAGTC ATTGGAGATT ATGCGGTTTT TGGAGATGAT GCCGGCAATC TTGTTTCGAT AAACTATAAG ACGGGCGCGA CTGTCAATGT AATCGACGCT TCAACGGTTT ATGGCTTTGA TGTGGGAAAA ATCCGCTCGT CTGTGACTTA CAGCGATGAT GAGACCGCGA TATTCAACAA TGAGACCGGC AGGATATATT TCACTTCTTT TAATTCCACT GTTAATGGAA GTTGCTATGC GCTAGGCTTT AATGCCAGCA CCGGTTCGTT CGTCGAAGAC GACAATTGGA GTTCTTACAT AGGATGCAGC ACTTCCACTC CCGCATATTA CAATGGCAGG ATCTATGTGT GTAACTATAC CATCGATTAC TCTATTCCTA TTTATGAAGG TAATCTCTGG TGCCTTAACG AGTCCAATGG ACATGATGAT ATCTGGAGTA ATCCCGCTTC TGTAGGCCCT GTTCAGAGCT CTCCAGCGGT ATCAACTTTC TATGGTCCGG GAAACGAGTA TATCTATGTC ACCACAAACT ATCCAACCGG CGGCATCTCC TGTGTGGATA GCGACGGAAC TGAAGTCTGG AACGAAACTT CATCAGGAAG CAATCTCTAC AGTCTGGCTG GAGCAGCCAT TTCAGGCGGC TGGGTCTTCT ACGGAAATGA CAATGGATAT CTCCACGGTC TTGCCAACTA TACCCGCTAC GACTTTAACG GAAGTACGGA TATGTGGGCT TACAAGTACC AGGTGGATAC CAAGCCTCCC AGCACTGCTA CGGACCCGGC TATAGAGTTC TCGTCTGCCG AATATAATGC CATCAAAACG GATGACGATA CTACTTACGC ATCTAGCCAA ACAACTACTG ATAGTTATTA TGCTGCGCAT CGGTTCGTGT TTAAGATTGA TGACAATGAG GAACCGTGGA TCATATCCAA CAATGGTTCT ATCAATGTGA CTTGGAACGG TAAAGCGTAT TATAGTGTTG GTGGTACAAA CGGTGCCACG CTGTACATAT GGAACGGCAC GGCATACGAA TCTCTAGATG ACGACGCAAA TGGTGTGAAC GAATTTTCGT TGATTGGTGG AGTTACATCG AACATCGGCA ACTACATTGA TGGTTCAGGA AATGTGACCG TGCTGGTTGT ACAGAAGGAT GAACAATCAA GCACTCCACC ACCAGCAAAA GTATCACATA TTAAGACAGA TTATGTTAAA CTGGTGGCAA CACCATAA
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Protein sequence | MNKLKILMVC LTLLLVAAVL PALGSDWPQF QKDKVHSGVT GDSAPIADPN STISWQHDHP VPSGGMGGID ESPIVYNGSV YAVIAGGNLT KYSLDGTAAG GNWPVSFVTN PDDLDFQLAT PAASNGHIFV VDTGYNRSLD YDLYAIDATT GSVSGRVHVN NSTGIQFLTP VTYVEASNGS KYVLFGSGNM SGWTMHEGEY YCYNVTDPAN MEICWNYSSP TGHYWAGAAV IGDYAVFGDD AGNLVSINYK TGATVNVIDA STVYGFDVGK IRSSVTYSDD ETAIFNNETG RIYFTSFNST VNGSCYALGF NASTGSFVED DNWSSYIGCS TSTPAYYNGR IYVCNYTIDY SIPIYEGNLW CLNESNGHDD IWSNPASVGP VQSSPAVSTF YGPGNEYIYV TTNYPTGGIS CVDSDGTEVW NETSSGSNLY SLAGAAISGG WVFYGNDNGY LHGLANYTRY DFNGSTDMWA YKYQVDTKPP STATDPAIEF SSAEYNAIKT DDDTTYASSQ TTTDSYYAAH RFVFKIDDNE EPWIISNNGS INVTWNGKAY YSVGGTNGAT LYIWNGTAYE SLDDDANGVN EFSLIGGVTS NIGNYIDGSG NVTVLVVQKD EQSSTPPPAK VSHIKTDYVK LVATP
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