Gene Mbar_A1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1799 
Symbol 
ID3625161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2234759 
End bp2236666 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content46% 
IMG OID637700681 
Producthypothetical protein 
Protein accessionYP_305320 
Protein GI73669305 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAT TGAAAATATT AATGGTTTGT TTAACCTTGC TCCTGGTGGC GGCTGTTCTG 
CCGGCGCTGG GTTCAGACTG GCCTCAGTTC CAAAAAGACA AAGTACACAG CGGAGTTACA
GGCGACAGCG CTCCGATAGC CGACCCTAAC TCAACTATAT CCTGGCAACA TGATCACCCT
GTTCCTTCCG GAGGTATGGG CGGGATTGAC GAGAGTCCAA TTGTGTATAA TGGCTCCGTA
TATGCCGTTA TAGCAGGAGG CAATCTTACT AAATATTCTC TGGATGGAAC GGCAGCCGGA
GGAAACTGGC CGGTTAGCTT TGTCACCAAC CCTGATGATC TTGATTTTCA GCTTGCTACA
CCGGCAGCTA GTAATGGGCA TATTTTTGTG GTAGATACCG GATACAACAG GTCTCTAGAT
TATGACCTCT ATGCTATCGA TGCAACTACC GGAAGTGTAT CTGGAAGGGT GCATGTAAAT
AACTCTACAG GCATTCAGTT TCTTACCCCA GTTACCTATG TAGAAGCCAG CAATGGGAGT
AAATACGTTT TATTCGGTTC GGGGAACATG AGTGGCTGGA CAATGCATGA AGGAGAGTAC
TACTGTTACA ATGTCACTGA CCCCGCCAAT ATGGAGATAT GTTGGAATTA TTCATCCCCA
ACAGGGCATT ACTGGGCAGG TGCAGCAGTC ATTGGAGATT ATGCGGTTTT TGGAGATGAT
GCCGGCAATC TTGTTTCGAT AAACTATAAG ACGGGCGCGA CTGTCAATGT AATCGACGCT
TCAACGGTTT ATGGCTTTGA TGTGGGAAAA ATCCGCTCGT CTGTGACTTA CAGCGATGAT
GAGACCGCGA TATTCAACAA TGAGACCGGC AGGATATATT TCACTTCTTT TAATTCCACT
GTTAATGGAA GTTGCTATGC GCTAGGCTTT AATGCCAGCA CCGGTTCGTT CGTCGAAGAC
GACAATTGGA GTTCTTACAT AGGATGCAGC ACTTCCACTC CCGCATATTA CAATGGCAGG
ATCTATGTGT GTAACTATAC CATCGATTAC TCTATTCCTA TTTATGAAGG TAATCTCTGG
TGCCTTAACG AGTCCAATGG ACATGATGAT ATCTGGAGTA ATCCCGCTTC TGTAGGCCCT
GTTCAGAGCT CTCCAGCGGT ATCAACTTTC TATGGTCCGG GAAACGAGTA TATCTATGTC
ACCACAAACT ATCCAACCGG CGGCATCTCC TGTGTGGATA GCGACGGAAC TGAAGTCTGG
AACGAAACTT CATCAGGAAG CAATCTCTAC AGTCTGGCTG GAGCAGCCAT TTCAGGCGGC
TGGGTCTTCT ACGGAAATGA CAATGGATAT CTCCACGGTC TTGCCAACTA TACCCGCTAC
GACTTTAACG GAAGTACGGA TATGTGGGCT TACAAGTACC AGGTGGATAC CAAGCCTCCC
AGCACTGCTA CGGACCCGGC TATAGAGTTC TCGTCTGCCG AATATAATGC CATCAAAACG
GATGACGATA CTACTTACGC ATCTAGCCAA ACAACTACTG ATAGTTATTA TGCTGCGCAT
CGGTTCGTGT TTAAGATTGA TGACAATGAG GAACCGTGGA TCATATCCAA CAATGGTTCT
ATCAATGTGA CTTGGAACGG TAAAGCGTAT TATAGTGTTG GTGGTACAAA CGGTGCCACG
CTGTACATAT GGAACGGCAC GGCATACGAA TCTCTAGATG ACGACGCAAA TGGTGTGAAC
GAATTTTCGT TGATTGGTGG AGTTACATCG AACATCGGCA ACTACATTGA TGGTTCAGGA
AATGTGACCG TGCTGGTTGT ACAGAAGGAT GAACAATCAA GCACTCCACC ACCAGCAAAA
GTATCACATA TTAAGACAGA TTATGTTAAA CTGGTGGCAA CACCATAA
 
Protein sequence
MNKLKILMVC LTLLLVAAVL PALGSDWPQF QKDKVHSGVT GDSAPIADPN STISWQHDHP 
VPSGGMGGID ESPIVYNGSV YAVIAGGNLT KYSLDGTAAG GNWPVSFVTN PDDLDFQLAT
PAASNGHIFV VDTGYNRSLD YDLYAIDATT GSVSGRVHVN NSTGIQFLTP VTYVEASNGS
KYVLFGSGNM SGWTMHEGEY YCYNVTDPAN MEICWNYSSP TGHYWAGAAV IGDYAVFGDD
AGNLVSINYK TGATVNVIDA STVYGFDVGK IRSSVTYSDD ETAIFNNETG RIYFTSFNST
VNGSCYALGF NASTGSFVED DNWSSYIGCS TSTPAYYNGR IYVCNYTIDY SIPIYEGNLW
CLNESNGHDD IWSNPASVGP VQSSPAVSTF YGPGNEYIYV TTNYPTGGIS CVDSDGTEVW
NETSSGSNLY SLAGAAISGG WVFYGNDNGY LHGLANYTRY DFNGSTDMWA YKYQVDTKPP
STATDPAIEF SSAEYNAIKT DDDTTYASSQ TTTDSYYAAH RFVFKIDDNE EPWIISNNGS
INVTWNGKAY YSVGGTNGAT LYIWNGTAYE SLDDDANGVN EFSLIGGVTS NIGNYIDGSG
NVTVLVVQKD EQSSTPPPAK VSHIKTDYVK LVATP