Gene Mbar_A1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1780 
Symbol 
ID3626263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2189328 
End bp2190251 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content43% 
IMG OID637700659 
Productphosphate ABC transporter, permease protein 
Protein accessionYP_305301 
Protein GI73669286 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTAG GCACAAAAGT AAAAGAAAGT GATAGTAAAG TGGCCAGGGC TCAGGGAGGA 
CTGAGTATGA GATTTAATGC AAAGACAAGT GAAAAGATCG CCTTTGCACT ACTTGGCCTC
TCAGCATTAA CAGTAGTAGG GTTTGTGCTA ATTATCCTTG CTTATATTAT TTACAATGGG
TATAGTGCAA TTAACGTTGA GTTCCTTACT GAAATGCCCA GACTTATGAT GACTCAGGGA
GGTATCTATC CAGCGATTGT GGGTACCGTA TACCTTATCA TAGGTTCCAT GATTATAGCC
CTTCCTATGG GAGTTATGGC TGCTATATAC CTTAATGAGT ATGCAGGAGA AACTCGCACA
ACCTGGTTAA TTGAAATGGC AATTAACAAT CTTGCAGGAA CTCCTTCTGT GATCTTTGGA
CTTTTCGGGA TGGCGCTATT TGTTAAATAT TTTGGTTTTG GTCCTTCCAT ACTTTCAGCC
TCACTTACAC TTTCCCTCCT GATCATTCCA GTGATTATCC GTTCCACTGA AGAAGCATTG
ATTGCGGTTC CTAATGAATA CCGGGAATCA TCCCTTGCAC TTGGGGTCAG TAAATGGCAG
ACAATCAGAC ATGCGGTACT GCCGGCTGCT ATTCCTGGAA TCATTACAGG TTCTATCCTG
AGTATTGGAA GGGTTGCAGG GGAAACGGCT CCGATTCTTT TTACTGGCGT GGCTTACTTC
TTACCAAGGC TACCTGATTC GATTTATTCT CAGTTTATGG CGCTCCCTTA CCACCTTTTC
GTGCTTGCAA CGGCAGGGAC AAATATTGCA AAAACTAGGT CTATTCAATA TGGAACAGCT
CTGGTTTTGT TGATTATCGT CCTCGGTTTG AATCTTATAG CTGTTCTGAT TCGCAGGCAC
TACCGAAACA AGTTGAAAAT TTAA
 
Protein sequence
MELGTKVKES DSKVARAQGG LSMRFNAKTS EKIAFALLGL SALTVVGFVL IILAYIIYNG 
YSAINVEFLT EMPRLMMTQG GIYPAIVGTV YLIIGSMIIA LPMGVMAAIY LNEYAGETRT
TWLIEMAINN LAGTPSVIFG LFGMALFVKY FGFGPSILSA SLTLSLLIIP VIIRSTEEAL
IAVPNEYRES SLALGVSKWQ TIRHAVLPAA IPGIITGSIL SIGRVAGETA PILFTGVAYF
LPRLPDSIYS QFMALPYHLF VLATAGTNIA KTRSIQYGTA LVLLIIVLGL NLIAVLIRRH
YRNKLKI