Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1777 |
Symbol | |
ID | 3626260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2183680 |
End bp | 2186478 |
Gene Length | 2799 bp |
Protein Length | 932 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700656 |
Product | replicative DNA polymerase I |
Protein accession | YP_305298 |
Protein GI | 73669283 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | [TIGR00592] DNA polymerase (pol2) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.227569 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATGG ATTTCCAGAT CTTGGATGCA GACTATGAAG TCATTAATGA CAGCAGCCCC GTAATCCGTC TCTTTGGCAG GGGAGTGGAC GGGAAGAGCG TTTGCTGTTT TGTTCCCGAT TTTGAACCTT ATTTTTATCT CAAGGCCTCT GGAGACCTTA ATGCCGTAGC CAGGCTTATC GAAGAGACTT TCACGCAAGT TAAAAAAGTA GAAATTGTTG AAAAATTCGA GCCTATTGGG TATCAGAAAA CAAAAATAAA GATGCTCAGG GTTACTACCC ACCTGCCCAG AGAGGTGCCC GAAATCAGGG ACGAGATTCT AAAGCTCCAG GAAGTACTGA AGGCTGAAGG CAAATGGGAA GTCTATGAGA CTGATATTCT CTTTAGAAAT CGTTTTTTAA TTGATAAAGA TCTCGGAGGT ATGGTCTGGG TATCTGCAGA AGGGGAAGCC GTTGACCCTG CAAAATATCT CCGTACAAAT GGTTCAGGCA GTTCTCGCTG TGGGAAGTTT ACATGTGATG CTTCAATCCT TGCATCCGGG TTAAATAAAG TTGAAAATCT TACTCTCGCC CCCCTGAAGT ATCTGGCTTT TGATATTGAA TGCCTGCCTC TTGATGGAGG AATGCCTTCT CCTGAGGTTT CGCCTATAAT CATGATTAGC TTTTCTTTCG AGCCTGAGTA TAAAGGACAT AAAACCCTCG TACTTCTGGC AAAACCTGTG GAAAATCTGA ATTCCGATGT TTGGTCTTAC ACGGACGAGA CCGAAATGTT AAATAAGTTT TTCGAGATCT TCTGCGATTA TGACCCTGAC ATTGTAATTG GATATAATCA CCAGGATTTC GATATTCCTT ATATAACGGA TAGAGTAAAA ACTCTGGTTT CAGAAGGGAA CTCAATAAAC CCTGTTGTCG GCCGGGACGG CAGCAAAATA GGTTACAGAA AATTCGGGCT TATTACTCGC ACTGAAATGA AGGGCCGGGT GGTTGTGGAT GCGCTTCCTC TGGTAAGAAG AGCTTTCAGT CTGAAGCAGT ACACCCTGCG AGCGGTTTCA AAGGAACTCC TGAGCCGTGA AAAACTGGAT GTTCCCCCTC TTGAAATGGA AGAGTACTGG CTCGATACAG GGGAAAAATT CAAAAAATTC GTTGACTATT CACGCAGGGA TGCAGAGCTT GCCCTGGAAC TTATCCTTAA TTTGAGACTC CTTGACAAAT ATGTGGCCCT TGCCCAGGTA AGCGGAAGCC TGCTTCAGGA AGTTGTTGAT GGAGGCCAGA CTTCGATGGT TGAAACTCTT CTTCTCAAAG AATTTGGGCT ACGCGACAGA GTTCTACTTC CAAAGCCTGA TGATGGAGTT TCGGCCGAGA GATATGCAAT GAGTTCCGAC CTCAAGGGTG GGGAAGTCCT GGAACCTAAG AAGGGCCTTC TGGAAAATGT GCTTATTCTT GACTACAAGT CTCTTTACCC AACTATAATG ATGGCACATA ACCTGTGTTA CACTACAGTA GTTACGGGTG ATAAGTCTGA TGGGGTGACT ATCAGGCCTC CATCCGGAGG AGAGTTCGTG CCTTCCGAGG TTTTCAAGGG AATCGTGCCT TCGATCCTTG AAGATTTGCT TAACAAGAGG ACACAGACAA AGAAAAGGAT GAGAGGGACT TCTAATGAAA ATGAGTATAG GGTACTTGAT GCTACTCAAC TCGCCCTGAA AATCCTGTTA AACAGCTTTT ATGGTTATTC CGGATATGCC AGGGCAAGGC TCTACAGCCT GACTCTTGCA AACGCTGTAA CCAGCTTTGG AAGAAGCAAC ATCCTCAATA CGCGGGAAAT TATCAACAAC ACTATAGGTA AAATAATTCT CAGGAATAAA ACAGCTCTGC TCCTTGATGA AGCAGGAGAA CTCTCTCCCC AGGATAGGGT AGTTGAACTG TCGGTTGCCT ACGGAGATAC TGACAGTGTC TTTGTCCACT GTAAATCTAG AGGAGACCTC TCTCTTGAGG AGGTTAGCCT TATAGGTAAC AGGCTTGCAA ATATCGTTTC TGTGTCTTTG CCTGACCCGA TGGAACTTGA ATTCGAATCT ATTGCTAAGC GTGCCCTTCT TATCGCAAAA AAACGCTATG CTCTCTGGTT TTTTGAGCCA AAAAATTCAG GTTGGGAAGA TAAGATTAAG GTTAAAGGCA TGGAAACCGT CCGAAGAGAC TGGTGTGAAT TAACTTCGGT AACTCTCAAT AGGGTGCTTG AGCTTGTGCT TATAAAAGGT GATGTTGACC AGGCTGTGGA ATACGTACGC CAGATAGTCA GCAAGGTCAG GAATCTCGAT CCTGCAAAAG ACTCCGAGAT TATCGAAAGC CTTGTTCTCA CACGCACCCT TACAAGGAAA ATTGAGAGTT ATAAGAACAA GCAGCCTCAC CTTACGGTTG CTGAAAATCT GAAAAAAAGG ACTGGTGTCG TTCCTTCTAT AGGAACAAGA ATACCTTTTG TCATTACCGC AGGAAAAGGA CTCTTTGTTG ATCGGGCTGA AGATCCGGAC TATGTAAGGG AGAAAAACAT CCCGATAGAT GTCGATTACT ATATTAAGAA ACAGATACTC CCCCCGGTGG AACGTATTCT TGAAGTTTTT GGGGTTAAGA TGTCTTCACT CGACTTTGAT TCCAAACAAA AAGGACTATT TGATTTTGAA GCTAAGAAGC CTGAAGTAAA GAAACAGGAT AAGCCTTCTT CAGAAAAGGA AAGTAAGGTA AAGGCTCAGG AACAGAATCT ATTTAAGGAA AATGGACATG CAGCTCAGAG TTCTCTCTTC GATTTCTGA
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Protein sequence | MPMDFQILDA DYEVINDSSP VIRLFGRGVD GKSVCCFVPD FEPYFYLKAS GDLNAVARLI EETFTQVKKV EIVEKFEPIG YQKTKIKMLR VTTHLPREVP EIRDEILKLQ EVLKAEGKWE VYETDILFRN RFLIDKDLGG MVWVSAEGEA VDPAKYLRTN GSGSSRCGKF TCDASILASG LNKVENLTLA PLKYLAFDIE CLPLDGGMPS PEVSPIIMIS FSFEPEYKGH KTLVLLAKPV ENLNSDVWSY TDETEMLNKF FEIFCDYDPD IVIGYNHQDF DIPYITDRVK TLVSEGNSIN PVVGRDGSKI GYRKFGLITR TEMKGRVVVD ALPLVRRAFS LKQYTLRAVS KELLSREKLD VPPLEMEEYW LDTGEKFKKF VDYSRRDAEL ALELILNLRL LDKYVALAQV SGSLLQEVVD GGQTSMVETL LLKEFGLRDR VLLPKPDDGV SAERYAMSSD LKGGEVLEPK KGLLENVLIL DYKSLYPTIM MAHNLCYTTV VTGDKSDGVT IRPPSGGEFV PSEVFKGIVP SILEDLLNKR TQTKKRMRGT SNENEYRVLD ATQLALKILL NSFYGYSGYA RARLYSLTLA NAVTSFGRSN ILNTREIINN TIGKIILRNK TALLLDEAGE LSPQDRVVEL SVAYGDTDSV FVHCKSRGDL SLEEVSLIGN RLANIVSVSL PDPMELEFES IAKRALLIAK KRYALWFFEP KNSGWEDKIK VKGMETVRRD WCELTSVTLN RVLELVLIKG DVDQAVEYVR QIVSKVRNLD PAKDSEIIES LVLTRTLTRK IESYKNKQPH LTVAENLKKR TGVVPSIGTR IPFVITAGKG LFVDRAEDPD YVREKNIPID VDYYIKKQIL PPVERILEVF GVKMSSLDFD SKQKGLFDFE AKKPEVKKQD KPSSEKESKV KAQEQNLFKE NGHAAQSSLF DF
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