Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1742 |
Symbol | |
ID | 3625787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 2132837 |
End bp | 2134432 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637700621 |
Product | transposase |
Protein accession | YP_305264 |
Protein GI | 73669249 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.12588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.422526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTTA CAACACGTTC TCTTGATCAT CACGGAATCG TTTCTGGCAT TTACGATGAA CTTGAAATTG GAAAAGTGAT TGATGAAGTG CTGCCCAAGT TTGGGCAGCA CAAGTTAGCT CACTCTATTG TAGTAAAGGC AATGATTCTT AACTGTCTTG GTTTCGTAGA CAGTCGTCTT TACATGTACT CTCAGTACTT TGAAACCCTT CCTGTTGAAC GGCTTCTTGG CCCCGAGATC AGTGCTTCTG ACCTTACTGA TGATGTTTTA GGTCGAACTC TTGACGCAAT ATATGAAGCA GATCCTACTC AACTTTTCAT GAAGCTTTCC TTGAAAATGC TGGAAATTGT TAACATCAGA ACTCAACTTC TCCAATCTGA CACCACTAAT TTTAGCCTTC ATGGAGATTA CAATTATATC AATGACGGTT CTGTCATCGA AATTACATAT GGTCACGCAA AAGACGGTAG AGATGACCTG AAACGTTTTG GACTTGGAAT GATAACAAAT CAGTATGGAA TTCCACTATT TGCAAAAGCT TACTCTGGTA ACGCATCAGA CAAAGAAACC ATCATAGAGG CAATGAAAAT ACTTCAAGAA AACATAACGT TTCCTGATGA TGTTTACTAC ATAGCTGATA GTGCTCTATA TTCTGAAGGA AACATCAAAG CAATGATAGA AGGCATGAAG TGGATTACTC GTGTTCCTTC AACACTAAAC CTTGCAAAAA ACTTGTTGAT TTCTGATCTT GAGTTCAAAA ACGGAGAGGA TCCACGCTAT TCATTTTACG AAACTATTGT TGAATATGGT GGTATAAAGC AAAAATGGGT AGTTGTTTAT TCCACAGAAA TGCAGAAAAG AAAAGACATT ACTTTTGAAA GAAAAATTCA AAAGAAGGTT AATGAATCCC AGAAAGATCT CAAAGACCTC AAAAAGATCA AGTTTGCTTG TGAAAAGGAT GCCATAGCAG CTTTGGAAAG ATGGAAGAAA GAGAACCCTC ATTGTTTGCT GGAAACCGTA GAGATTTCCA CGGTTTCAAC AAAGGAAAAC GGTAAAATAG GAAGACCAAA GAAGAATGAA AAGCCTATTA TTCACTATGT TGTAAATGCA AAAGCAGTCC GAAACTACGA AATAGAATTG AATGAAAAAG AGTATCAAGG AAGATTTATA ATCGCAAGTA ACGATCTCAA TCTTGATGCT GAAAAGATGC TGGAATACTA CAAGAACCAG AGCAAGGTCG AAAAAGGTTT CAGGTTCATA AAGGATAAAA GTTTCAGGGT TTCCGAGGTT TATTTGAAAA AACCTCAAAG AATTGAAGCT CTCTCAATGA TAATGGTGTT AACTCTGATG GTCTATTCGG TAGCGGAATG GCAGCTGAGA GAGAAGCTAA AAGAAACAGG GGAAACAATA CCGAATCAGG TTAAAAAGCA AACACAAAAG CCCACTTTGA AGTGGGCTTT TGTGCTGATG AGGGGAATTA CAGAAGTAAA AGTGGAAGTT GATTCAAAGG TGATAACCAA AATTGCCAAC ATGGATGAAA TTAAGAGCAA GATAATAAGG TTGATGGGGA AAAATTGTGA AAAATACTAC TTTTGA
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Protein sequence | MLVTTRSLDH HGIVSGIYDE LEIGKVIDEV LPKFGQHKLA HSIVVKAMIL NCLGFVDSRL YMYSQYFETL PVERLLGPEI SASDLTDDVL GRTLDAIYEA DPTQLFMKLS LKMLEIVNIR TQLLQSDTTN FSLHGDYNYI NDGSVIEITY GHAKDGRDDL KRFGLGMITN QYGIPLFAKA YSGNASDKET IIEAMKILQE NITFPDDVYY IADSALYSEG NIKAMIEGMK WITRVPSTLN LAKNLLISDL EFKNGEDPRY SFYETIVEYG GIKQKWVVVY STEMQKRKDI TFERKIQKKV NESQKDLKDL KKIKFACEKD AIAALERWKK ENPHCLLETV EISTVSTKEN GKIGRPKKNE KPIIHYVVNA KAVRNYEIEL NEKEYQGRFI IASNDLNLDA EKMLEYYKNQ SKVEKGFRFI KDKSFRVSEV YLKKPQRIEA LSMIMVLTLM VYSVAEWQLR EKLKETGETI PNQVKKQTQK PTLKWAFVLM RGITEVKVEV DSKVITKIAN MDEIKSKIIR LMGKNCEKYY F
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