Gene Mbar_A1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1721 
Symbol 
ID3626760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2114740 
End bp2115537 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content43% 
IMG OID637700600 
Producthypothetical protein 
Protein accessionYP_305243 
Protein GI73669228 
COG category[S] Function unknown 
COG ID[COG4871] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGAA ATCCGAATGA GATAAAACTT GTAAATAATG CTATGTCTAA TGCCACCAGA 
AGGAAGATTA TGAACTTTCT TGTAGATGGC GATAGAAGTA CCGAAGAAGT CGCAGAAGCC
GCAGGAAAAA CAATGCTCGA CTTTCATCTC AAACTCCTGC AACAGGCAAA TCTGATTGAA
TTAGTAGACG GAACAGTCAG ATTAAGTGAA TACGGCAGAA ATTTTCTGAA GGGCAAGGAA
GAAAAAGATA CTCAAAAAAA CACCGATCTC TCTCAGGCAA AGCCTGTGGA GATTGCAGAA
ATTCGGCAGC TTTTACCCTG TATAGCAGAC TCCTCAAAAT TCAGGGTAAT TGCAAATATG
ACTCCCCCGC TTGGTGGAAT TCTCAAAGTT TTTGAACCTC TCTTTCCCAG AGGCAGATAC
TCGGACAAGA TTAACGCCCT GATTATGCAA AAAGGAGAAG TTCTTACAAC GGTTTACGGT
ACTGGAAAAA TTACCATGAC AATGATTAAA AACGAGGCAG AGGCCAGAGA AGCACTTGAA
AGTCTTAGAA GTATCATCAA TGAGGCTATT GCAAAGGGTG TTGCTCCGGC TCCTCGGGAA
AAGATTCGGG TCGAACCCAT GGAGCTTTAC AAATACTTGC CTCAGACCAA TTGCGGTAAA
TGCGGCGAAC AGAGCTGTTA TACTTTTGCC ATAAAACTCA TGAGCGGAGA AGCTTCCCTT
GATAAGTGTA CCTCGCTCAA GGAGCCGAAG TACGCAACCA ACCAGGAACA TTTGCAGGTT
CTCAGTGCGT ACATTTGA
 
Protein sequence
MPGNPNEIKL VNNAMSNATR RKIMNFLVDG DRSTEEVAEA AGKTMLDFHL KLLQQANLIE 
LVDGTVRLSE YGRNFLKGKE EKDTQKNTDL SQAKPVEIAE IRQLLPCIAD SSKFRVIANM
TPPLGGILKV FEPLFPRGRY SDKINALIMQ KGEVLTTVYG TGKITMTMIK NEAEAREALE
SLRSIINEAI AKGVAPAPRE KIRVEPMELY KYLPQTNCGK CGEQSCYTFA IKLMSGEASL
DKCTSLKEPK YATNQEHLQV LSAYI