| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1715 |
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| Symbol | |
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| ID | 3626754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 2110827 |
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| End bp | 2111471 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637700594 |
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| Product | cytochrome c-type biogenesis protein CcdA |
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| Protein accession | YP_305237 |
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| Protein GI | 73669222 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0785] Cytochrome c biogenesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0270352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCCA ATTTTTTACC AGTTGCAGCT TTTTTTGCGG GAGTCGTTAG TGTGCTCTCT
CCATGTATCC TGCCTGTAAT TCCGGCAGTT TTTGCATACT CAACTGGAGA AGGAAAGTTC
AGACCAATTG CAATCATATT AGGTTTGTCT CTTTCCTTTA CTTGCATGGG AATTGTTACT
TCTATTTTTG GGGCAACGCT TACAGCTTAT CTCGATTACC TTAACATTTT TGCAGAAGTT
CTTCTGATCA TAATGGGCAT TTCGCTACTA TTTGATTTAA ACACATTCAA CATTTTCGGA
AAATTTTCAT CCCTTGCAAA CTCTAAACGA GAAGGCCTTT TAGGAGGGTT TTTACTTGGG
CTTTCTCTTG GGATTGTCTG GCTTCCGTGT GTTGGCCCAG TACTGGGTTC AATCCTTACA
ATGGTTGCTG TTTCAGGCGA AGTTGTTTAT GGAGGATTAA TGCTTTTCAT ATATTCTCTT
GGTTTTTCAG TTCCAATGCT TCTTGTTGCT TATTCTGCAA GTTTTTCTTC CACGAGGCTT
CAGAAAGTTT CAAAATTCGG TTTTCCATTA AAAAAAGTTG CAGGCTTTAT AATTCTAGGA
GTCGGCTTTT ATATGGTTTA TAAGAACCAT TTCAGCGGTA TCTGA
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| Protein sequence | MFSNFLPVAA FFAGVVSVLS PCILPVIPAV FAYSTGEGKF RPIAIILGLS LSFTCMGIVT
SIFGATLTAY LDYLNIFAEV LLIIMGISLL FDLNTFNIFG KFSSLANSKR EGLLGGFLLG
LSLGIVWLPC VGPVLGSILT MVAVSGEVVY GGLMLFIYSL GFSVPMLLVA YSASFSSTRL
QKVSKFGFPL KKVAGFIILG VGFYMVYKNH FSGI
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