| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1713 |
|---|
| Symbol | |
|---|
| ID | 3627394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 2109177 |
|---|
| End bp | 2109725 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637700592 |
|---|
| Product | tetrahydromethanopterin S-methyltransferase subunit A |
|---|
| Protein accession | YP_305235 |
|---|
| Protein GI | 73669220 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4063] Tetrahydromethanopterin S-methyltransferase, subunit A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0103969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATGGC CTATAACTTC TGGCGATTAT ATAGTAGGAG ACCCAAAATC TCCTGTGGCA
GTAGTAACCC TTGCTTCTGA TTATCGAAAC TTGAATTTGA AAAACTACGC CATCTGCGGA
ACCTGTTTTA CGGAAAATTT TGGGATTGAG AAGATAATAG TTAATGTGCT TTCAAATCCT
CGCATCAGCT GCCTGATTGT CTGCGGGAAG GAAAGTGAAC ATTTTGCCGG GCAGTCCCTG
CTGTCACTTG CCGAAAATGG GGTTTCGACT TTCGGAGGGT CAAAAAAGAT TATCGGGTCC
GAAGGAGTAA TTCCTTACCT TAACGAAATT CCAGCGACTG CAATCTCTCG TTTTCTTAGG
GAAATTGAAG TAATTGACCT CGTAGGGATA ACCGACCCTT CGGTCATCCA GCAGGCAATA
GATTCCTGTA GTAGAAAAGA AAGAAGCGAA GCTCCGGAGC TTTTCATGCC CGAAATTGAT
GAAAATAGCT GGAAGAAATA TGAATCTCAG GTAAAGCAGA ATGTAATGTC TAAAATTAAA
AGAGGATAA
|
|---|
| Protein sequence | MAWPITSGDY IVGDPKSPVA VVTLASDYRN LNLKNYAICG TCFTENFGIE KIIVNVLSNP
RISCLIVCGK ESEHFAGQSL LSLAENGVST FGGSKKIIGS EGVIPYLNEI PATAISRFLR
EIEVIDLVGI TDPSVIQQAI DSCSRKERSE APELFMPEID ENSWKKYESQ VKQNVMSKIK
RG
|
|---|
| |