Gene Mbar_A1626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1626 
Symbol 
ID3627324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp2002090 
End bp2004024 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content41% 
IMG OID637700506 
Producthypothetical protein 
Protein accessionYP_305151 
Protein GI73669136 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAA AAATTCTGAA ACCGTTAAGA AAAACTGTTT CTGAACTGTT ATGTGTCATA 
TGTACATCAT TATTATTAAT ATCTCTATTT TCATTTACCG CCTTGGCTGG AGATATAAAC
ACGTCCCCCA ATATAAACTC AGACGATAAG ATCTCAGCAA GTGTAGTTTC TAAACTTACT
GAAATTTCAG GAGATGAACA AATTCCAGTG ATTATAACGC TACCAAATCA AAAGATTGCG
TTTAATACTG CTGCTGGAAA ATATCAAATT GAGAGCGAAC AGAAAAATCT CATAAAGTTT
CTTGAGAATG AAAAATCAAA AAACAAAGTA AATAAAATAA AACCTATCAA AATTATCAAT
GCTGTTGCCG CCAAGGTAAA CCCTGAAGTT TTAGCTTCTC TTGCCGGAAG ATCTGACGTT
TCGAAGATTG AACTTGACGA AGTCGTCTCT ATAGTAGGGC AATCAGAACC TTCTTTCAAG
AAAATAGCAG CATCGACTAC CCTGTCAACT GCGGCATCCA CAAATGCATG GGGAGTGGAT
AAGATTGACG CGCCTGCAGT ATGGCAGCAA GGTATAAACG GTAAAGGAAT AACTGTTGCT
GTCGTGGATA CAGGAATTGA TGCAACACAC CCCGATCTTG ACGATCTTGA TGACAATCCC
AGTACAAATG ATCCTAAAGT TGTAGGCTGG GTTGACTATA TAAACTCGCA GTCGTCTGCT
TATGACGATA ACGGGCACGG TACCCATGTA GCCGGAATCG TTTCAGGAAC CGGAGATAAT
GGGATACAAA CAGGAGTTGC ACCAGGTACA AAGCTGCTTG TAGCAAAAGT ATTCGATTCA
GAAGGTGATG GATATTTATC CACCTGTATT CTTGGTTTTG AATGGGCAGT TAATAATAAT
GCCCGTATTA TAAGTTTTAG CGGCGGATCT CCAGAACATG ATTCGTTATT TACAACCATG
ATAAACAAGG TAGTGGCGGC AGGTGTAGTT CCTGTTATAG CGGCCGGCAA TGATGGTGAT
GGATCTGGCA CAATCACATG CCCGGGTGAT GAACTCAATT CACTCACTGT CGGTGCAACG
GATTCCTCCG ATGCAATAGC AGACTTTAGC AGCCGAGGTC CTGTCACTCT AGATGATCAG
ACATACATTA AACCCGATAT CTCTGCGCCT GGTGTGTCTA TTCCTTCAAC ATATCCAGGA
GACGGATACG CATATGGGGA TGGAACTTCC ATGGCAGCGC CACACGTTTC CGGTACTGTA
GCATTAATTC TGGAAAAGAA ACCGACTATG ACGCCGGCTG AAGTAAAGAA GGAATTAGAA
AGTACAGCAG TAGATCTTGG ATCGGCAGGA AAGGATAATG ATTACGGTTC AGGCCGGATC
GATGCATATG ATGCAGTATT CGGCAAAGGA CCTGTTGCAA ACTTTTATGC AAAACCGACC
TCTGGAAAAG TCCCATTAAC AGTTGCCTTT ACTGACACCA GCACAGGAAC GCCGACTAAA
TGGAGATGGA ATTTTGGAGA TGGATCAAAG TCATTCCTCC AGAATCCAAA GCATAAATAT
TCAAAGGCAG GAACATATAC TGTTAACTTG ACAGTAAAGA ATGCTAAAGG CAAGAACACG
GTAACAAAAA CAGATTACAT AGTAGTAATC TCAAAACCTA CTGCTGCATT CTCTGCATCT
CCTACCTCAG GAAAAGCCCC ATTAACTGTT GCCTTTACTG ATAAGAGTTC AGGAAACCCC
ACTGCATGGA AATGGAGCTT TGGAGACGGA ACAATTTCAA GAGAAAAGAA TCCAACGCAT
CAGTATTTAC AGGAAGGAAA ATATAAGATT ACACTTACAG TAAGCAATGC TGCAGGCAAA
AGTACTACAA AGAAGATAAA CTACATAAAA GTGACAACAA ATACAAGACC AGGAATATAC
TCTGAAAGTA AATAA
 
Protein sequence
MEKKILKPLR KTVSELLCVI CTSLLLISLF SFTALAGDIN TSPNINSDDK ISASVVSKLT 
EISGDEQIPV IITLPNQKIA FNTAAGKYQI ESEQKNLIKF LENEKSKNKV NKIKPIKIIN
AVAAKVNPEV LASLAGRSDV SKIELDEVVS IVGQSEPSFK KIAASTTLST AASTNAWGVD
KIDAPAVWQQ GINGKGITVA VVDTGIDATH PDLDDLDDNP STNDPKVVGW VDYINSQSSA
YDDNGHGTHV AGIVSGTGDN GIQTGVAPGT KLLVAKVFDS EGDGYLSTCI LGFEWAVNNN
ARIISFSGGS PEHDSLFTTM INKVVAAGVV PVIAAGNDGD GSGTITCPGD ELNSLTVGAT
DSSDAIADFS SRGPVTLDDQ TYIKPDISAP GVSIPSTYPG DGYAYGDGTS MAAPHVSGTV
ALILEKKPTM TPAEVKKELE STAVDLGSAG KDNDYGSGRI DAYDAVFGKG PVANFYAKPT
SGKVPLTVAF TDTSTGTPTK WRWNFGDGSK SFLQNPKHKY SKAGTYTVNL TVKNAKGKNT
VTKTDYIVVI SKPTAAFSAS PTSGKAPLTV AFTDKSSGNP TAWKWSFGDG TISREKNPTH
QYLQEGKYKI TLTVSNAAGK STTKKINYIK VTTNTRPGIY SESK