Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1603 |
Symbol | |
ID | 3624227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1973774 |
End bp | 1974898 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637700484 |
Product | geranylgeranyl reductase |
Protein accession | YP_305129 |
Protein GI | 73669114 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATGATG TAATCATTAT TGGCGGTGGT CCTTCCGGAG CTTCGGCCGG AAGAAGGGCA GGAAAACTTG GCATGAAAAC ACTGCTGCTT GACAAAGAAG AATTTCCCAG ATACAAGCCC TGCGGGGGTG GACTCTCAGA ACATGCGATG TCTTATCTCG ATTTTGAACT CCCTCAAGAT ATTATTGAAT GGGATGTTAC AGGGGCAAGG ATCATTTTCA GAGACCAGTT GATTGAGGTA CACAAGGATC ATCGGGTATC TGCGCTTGTA TCCAGGAACA AATTTGATAA TTTCCTTCTT GAAAAAGCAA AAGAAACAAA CATTGAAGTC CATACCGGAG AAAAAGCTCT GTGCTGCAGG GAAATGCCTT ATTGTGTTGA AGTTGATACC AGGCAGGGGA CATACCAGGC AAAATTTGCG ATAATCGCAG AAGGTGCCCA TGGACTTGTC AAAACCTGTG TGCGGCCCGC AGATAATAAA GAAGAATATG GAATCTGCCT TGTTACTGAA GTTCCTGCTG ACGAAAGAGA AATGGAAAAA CGCCTGGGAG ACGCCGTGGA ACTGCATTTT GGGGTTGCTG GAGGCGGATA TGGCTGGATA TTCCCTCATA AAACCTATTA TTCCGTTGGA ATCGGCGGAG TTGTTAAGGA CTTCCCGCAT CCTAAAGAAG CCATGCTTAA CTTCCTCAAG GAAAATGGCT TTTCCGGAGA ATATAAACTT CACGGGCACA AAATCCCCTG GGGAGGAATT AAAAGAAAAG TGGTGGGTTC AAGGGTCCTT CTAAGCGGAG ATGCTGCCGG ATATGTAGAT GCTTTTTCAG GTGAGGGACT TGCCTATGCG ATTTGTTCAG GGCAGTTTGC AGCTGAGGCA ATTGCAAGGG TTTGTCTGCA AGGAAAAAAT CTGAAAGATC TAAGCAAATA TGAGTCTCTC TGCCGTGCTG AGTTTGGTAC TCACCTCAAG TACTCCCTTC TGTTTTCCAG GATAATGCAT CATTTCCCTG AACGGACATT TAAGATCTTC ACATCAAGTG ATAAAATGCT TGATAAATAT CTTGAGGTTA TGGATTTTAC GATTGATTAT AAGGATTACC TGCGCTGGGC CCTTTTGAAT TTCAAACTCA GGTAA
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Protein sequence | MYDVIIIGGG PSGASAGRRA GKLGMKTLLL DKEEFPRYKP CGGGLSEHAM SYLDFELPQD IIEWDVTGAR IIFRDQLIEV HKDHRVSALV SRNKFDNFLL EKAKETNIEV HTGEKALCCR EMPYCVEVDT RQGTYQAKFA IIAEGAHGLV KTCVRPADNK EEYGICLVTE VPADEREMEK RLGDAVELHF GVAGGGYGWI FPHKTYYSVG IGGVVKDFPH PKEAMLNFLK ENGFSGEYKL HGHKIPWGGI KRKVVGSRVL LSGDAAGYVD AFSGEGLAYA ICSGQFAAEA IARVCLQGKN LKDLSKYESL CRAEFGTHLK YSLLFSRIMH HFPERTFKIF TSSDKMLDKY LEVMDFTIDY KDYLRWALLN FKLR
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