Gene Mbar_A1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1574 
Symbol 
ID3625350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1936473 
End bp1938236 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content40% 
IMG OID637700456 
Producthypothetical protein 
Protein accessionYP_305101 
Protein GI73669086 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGCA AAAGAGTCGG GCTTGTTATT GGAAATAATT ATCCAAATTC CGATAAAAAA 
TTGAGGTTTG CAGTAGCTGA TGCTCTCGCA ATGAAGGAGG TTCTGCTGAA TAAAGATATT
TGTGGGTTTG ATGAAGTTAT TGATCTGATC GATCGAACAA GTAAAGAAGC TCTTGTTGAA
GTCGAGAAGA TTCTTAAAAA GGTAGACAGC AATCTTGTTT TTATCTATTT TTCAGGACAT
GGAAAAAAAG ACTTTGAAAA TGATTTATGT CTCCTGTTTA ACGATACAGA AGAAGACGCC
TTACTGGCAA CCTCATTAAC TTTTGATTTT ATTAACAAAT GCAGGCGATA TCCTTCTCGA
AAATCTGTAA TCATAGTCCT TGATTGCTGT TACAGCGGTG CTGCTGGAAA AAGGGATACT
TCTGATGTGA TTGAAGCCTT GAAAAAACAT TCCGGTTCAG GAACAATTAT TCTTACTTCA
ACCGGGTTGA CAGGTTCTCC TGCTGCAAGA GAAGAAGAGA AGTTCGGGCA CGGAATTTTT
ACTAATTATT TGATAGAAGG ACTGGAGAAA GGTTACGCTG ATAAAGGCAA TGGTTACATA
TCCATTGAAG AGTTGTATGA CTACGCTTTT AAAAAGACAA AATCTGAGGG GTACCAATCT
CCAAAGAAGG AAGGTAACAT AGAAGGGACG ATATTTATTG GCACAAATCC TCAAAAGATA
AGGGAAAATG AATACAATTC AAAGAAAAGT AAACTTCTAA ATGAATATGT TAGAACACTT
CATCCCCTCA TACTAAATGA ATCCCTTACA GTCTTGAGAA AAGCCTATGA TGTTCCTCCT
TCTCTTGAGT CGGTTGAAGA AACTATATAC GGTCTGCTTA ATTCACTATT GAAAAGTGAG
CTTCAACCTG ATAATTATAG TGATGCAGTA CAGCATCTTA AGGGAATAAG TACAAGTTCT
GAAAGCTCTC GAAATATGAA CAAAATTGAT AGATCAAATA CTGCTGTTTT AATAAGTGAA
AATAAAGAGC CTCTTGTGAA CTCTGAAGAA CCTTATATTC CCAAAACCTT CACCAGCCCT
TATACAGGTA TGGAATTTGT GCTGATCCCA GCCGGAGAAT TTATGATGGG GTCTCCTTCT
GATGAAAAGG GAAGGTATGA TCAAGAAGGT CCTGTCCATA AAGTGACAAT TAACAATCCT
TTTTATATGG GCAAATATCC GGTCACTCAG AGACAATGGA AAAAGGCTAT GGGTACCAAT
CCCTCCAAAT TCAAAGGTGA TGATTTGCCT GTAGAAAATG TTTCTTGGGA AAAGATTCAA
AAATTTGTTA AAGTACTGAA TGAAAAAGAA GGCGCTGATA AATATCGTCT ACCATCAGAA
GCTGAATGGG AATACGCCTG CTGGGCCAGC ACACAAACAA GGTATTCTTT TGGTGACGAT
GAGTCAAAGC TTAATGAATA TGCGTGGTAC GATAAAAATT CAGGTTCTAA AACTCATCCA
GTTGGTCAGA AAAAACCTAA TCAATGGGGT TTGTATGATA TGCATGGGAA TGTCTCGGAA
TGGGTTCAGG ACAGATGGCA TAATAAATAC GAGGGTGCTC CTTCCGATGG CAGTGCCTGG
GAAGATGGAG ATGGTTCCGG CCGTAAGATT CGGGGCGGCA GCTGTGAAGA CAGTGCTAGG
GGCTGCCGGT CGGCGTCCCG CCACTGGAGC GGTTCCGCCG ACCGTTTCAA CGACGTTGGC
TTCCGTCTTC TGAGGAAACT GTAA
 
Protein sequence
MTGKRVGLVI GNNYPNSDKK LRFAVADALA MKEVLLNKDI CGFDEVIDLI DRTSKEALVE 
VEKILKKVDS NLVFIYFSGH GKKDFENDLC LLFNDTEEDA LLATSLTFDF INKCRRYPSR
KSVIIVLDCC YSGAAGKRDT SDVIEALKKH SGSGTIILTS TGLTGSPAAR EEEKFGHGIF
TNYLIEGLEK GYADKGNGYI SIEELYDYAF KKTKSEGYQS PKKEGNIEGT IFIGTNPQKI
RENEYNSKKS KLLNEYVRTL HPLILNESLT VLRKAYDVPP SLESVEETIY GLLNSLLKSE
LQPDNYSDAV QHLKGISTSS ESSRNMNKID RSNTAVLISE NKEPLVNSEE PYIPKTFTSP
YTGMEFVLIP AGEFMMGSPS DEKGRYDQEG PVHKVTINNP FYMGKYPVTQ RQWKKAMGTN
PSKFKGDDLP VENVSWEKIQ KFVKVLNEKE GADKYRLPSE AEWEYACWAS TQTRYSFGDD
ESKLNEYAWY DKNSGSKTHP VGQKKPNQWG LYDMHGNVSE WVQDRWHNKY EGAPSDGSAW
EDGDGSGRKI RGGSCEDSAR GCRSASRHWS GSADRFNDVG FRLLRKL