| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1531 |
|---|
| Symbol | |
|---|
| ID | 3625245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | + |
|---|
| Start bp | 1889801 |
|---|
| End bp | 1890577 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637700415 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_305062 |
|---|
| Protein GI | 73669047 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATACA TTTTATTGGG ATCGACACTC TTAATTTTTT TCATAATTCT GTTTTATTTT
GCCTCAGTCA CTCCTCCACG ACCAGCATGT TTCCAAGGAG TCTGGAATAA TTGTAATTTT
TCGAAGCCTG CTGAAGACTG GTCTGAAGCT GCGAGACAGT TTGGAGGTAA ATCTGCAGTA
GTTGACTTGG TCGTCGCTCA GGCACATGAA AGTAAACTCA CATATGTGCC TTTTCCTTTT
GAAAAAAATG GAAAAATTTA CAGTTATAAT CAGACTGACA AAGTTGAGCC TTATCTGGAT
AGATTCGATA GAGACGGATT GAAGGTAATT CTTTCAATTC AACCTAATGA GGTTGATGTA
GCTGATTTGA TCGATATTGT ACTTTCGAGA TACGGTCATC ACAAAAGTGT CATAGGTGTA
AATATTGATA TGGAGTGGAA ATTAACAGGA AACCCTAATC ATGCCAGCAA CAAGGAGCGT
GATCTCTGGT TAACACAGAT TCAAAGCTAT AACCCTAAGT TTAAACTCTT CCTGACCAAT
TTTCAAGACC ATACCTATTT TCCTGATGAT ACAAAAGATC TTGTCATTCT ATATGATGGT
GAGAGAACTA CTCAAGATAA ACTCATGGCC AAATATGGAG AACTTGCTGG TTACTACACA
TCGGTAGGAA TATATACTGG TTATCTTTCG AGTACCCCAC CAACCGCGTC TTATGAATGT
ATTATGGATG CAGCTCCAAA TACAGAGTAC ATCCTTCATG TAATATATTT CCAATAA
|
|---|
| Protein sequence | MVYILLGSTL LIFFIILFYF ASVTPPRPAC FQGVWNNCNF SKPAEDWSEA ARQFGGKSAV
VDLVVAQAHE SKLTYVPFPF EKNGKIYSYN QTDKVEPYLD RFDRDGLKVI LSIQPNEVDV
ADLIDIVLSR YGHHKSVIGV NIDMEWKLTG NPNHASNKER DLWLTQIQSY NPKFKLFLTN
FQDHTYFPDD TKDLVILYDG ERTTQDKLMA KYGELAGYYT SVGIYTGYLS STPPTASYEC
IMDAAPNTEY ILHVIYFQ
|
|---|
| |