Gene Mbar_A1522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1522 
Symbol 
ID3626923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1878565 
End bp1878969 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content42% 
IMG OID637700406 
Producthypothetical protein 
Protein accessionYP_305053 
Protein GI73669038 
COG category[R] General function prediction only 
COG ID[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.249328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAT TAGATGAAAA CATGAAAACT GCCTTTTCAA AGGTGAAGAT CTTTCCTGTA 
GCTACGGCCT CAAAGGATGG AGTTCCGAAT GTTGTACCTA TAGGATTCTG CCAGCTTGTG
GATGACGAAA CAATCTGGAT TGCAGATAAT TTCATGCTTA AGTCCCTGGC AAACCTAAAA
GAAAATCCCA ATGTTGCAGT TTACGTTTGG GGCCCTGATA CAGGTGGCTG CTTCCAAATA
AAAGGTAAAG CGGATGTTAT TGATACTGGG GAAAAGTTTG AAAAAATGAG GTCAATTGTG
CAGACAGCAA AACCAGGACT TCCTGCAAAA ACTCTGATAG AAGTCAAGAT TACTGGGGTC
TTCCAGTGTG CTCCCGGCCC GGATGCAGGA AAAAAATTGC TCTGA
 
Protein sequence
MVKLDENMKT AFSKVKIFPV ATASKDGVPN VVPIGFCQLV DDETIWIADN FMLKSLANLK 
ENPNVAVYVW GPDTGGCFQI KGKADVIDTG EKFEKMRSIV QTAKPGLPAK TLIEVKITGV
FQCAPGPDAG KKLL