| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1492 |
|---|
| Symbol | |
|---|
| ID | 3627678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosarcina barkeri str. Fusaro |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007355 |
|---|
| Strand | - |
|---|
| Start bp | 1843998 |
|---|
| End bp | 1844585 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637700379 |
|---|
| Product | cobalt-precorrin-6Y C(5)-methyltransferase |
|---|
| Protein accession | YP_305027 |
|---|
| Protein GI | 73669012 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2241] Precorrin-6B methylase 1 |
|---|
| TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTG TAGGAGTCGG GGTCGGGCCC GGAATGCTCA CGGAAGAAGG AATAAAGGCT
ATAAAGAAAG CTTCTGTGGT TTATGGTGCA AAAAGAGCCA TTGAGATTGC CCAGGAATAT
ATTACATGTG AAGCAAAACC GATCAAGGAC TATAAATCAC TTCATCTCTT GCCAGCCGAT
GCAGTCATCC TGTCTACAGG CGATCCCATG TTTTCAGGGC TCGGGAAATT CGCAAGGGAG
AAAGACACAG TTATACCTGG GATTTCTTCA ATGCAGGTGG CCTGTGCGCG TACAAAAGTG
AACCTGACCA ACCTCTGCGC AATCACAGCC CACGGCAGGG ACTCAGAACC TGCAAAAGCC
GAGTTGATCC GGGAGTTAAG GAATGGAAGA AATATCTTCC TGCTGCCGGA AGAAAACTTT
GGATCGCTTG AGGTCGCAGA AATTCTAAAA GAGCTGGGTA TTGAAGCTGA ACTTTATACC
TGCGAAAACC TTGGCTATCC TGAAGAAAGA ATTGCAAAAG GTACTCCTGA AAATCCACCG
GTTCCGGAAA CGATTCTTTA CGGGCTGCTT GTCGTACAAA AAAGGTAA
|
|---|
| Protein sequence | MIVVGVGVGP GMLTEEGIKA IKKASVVYGA KRAIEIAQEY ITCEAKPIKD YKSLHLLPAD
AVILSTGDPM FSGLGKFARE KDTVIPGISS MQVACARTKV NLTNLCAITA HGRDSEPAKA
ELIRELRNGR NIFLLPEENF GSLEVAEILK ELGIEAELYT CENLGYPEER IAKGTPENPP
VPETILYGLL VVQKR
|
|---|
| |