| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1478 |
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| Symbol | |
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| ID | 3627535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1821150 |
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| End bp | 1823177 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637700365 |
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| Product | cell surface protein |
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| Protein accession | YP_305014 |
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| Protein GI | 73668999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA AAGAGACTAT TTATAAAATA ATCTTATTTT CAATATCCTT AGTTTTGCTT
TTATTTCCTT CCGCAGTATC AGCAGCTACA GCGGAAAGCG GTTCGCCCAC GATCACCGAA
ACTCAGATTA CCACCAATAC ATCATATCAA TGGGGTCCTG ATATCTATGG TGATAGGATA
GTGTGGAGGG ATGGACGTAA TGGAAATTCA GATATCTATA TGTATGATAT CTCCACTAAG
AAGGAAACTC GAATAACCAC CAATACATCA GATAAATGGG ATCCTGCAAT CTATGGAAAT
AGGATAGTGT GGGTGGATGA TCGTAATAGA AGCTGGGATA TCTACATGTA TGATCTCTCC
ACTAAAAAAG AAACTCAAAT CTCTAATTAT GAATTTGAAT TTGAAGATAC GGGGAACCCT
GCAGTCTACG GCGACAAGAT TGTGTGGACA CATGGTTTCG AGGAATACTG GCAGATCTAC
ATGTACGACC TTTCCACTAA GAAGGAAACT CAAATCACCA CTAATGGACG AGCATACTAT
CCTGCTATTT ATGGTAATAA AATAGTTTGG CTGGATGACC GAGATAGTGA TTATAACTAT
GATATTTACA TGTACGATCT CTCCACTAAG AAGGAAAGTC AGATAACCAC CAGCGGATCA
GCAGACAACC CTGCTATTTA CGGTAACAGG ATAGTATACG CCGACGATCG CAAAGGAAAC
TATGATATCT ATATGTATGA TATTTCCACT AAAGCGGAAA CTCAGATAAC CAGTAGTCCA
GATAACCAGG TGTCTCCTAA TATCTATGGT AACAGGATAT TATGGAAGGA TGTTGGTGGA
GAGGATGACG GTGGGGAATA TCATGGTATA TACATGTGCG ATCTTTCCAC TAATCAGAAG
TTTAAAATTA CCAGCCATGG AGATTGGGAT GATCCTGCTA TCTATGGTAA CAGAGTAGTA
TATACCGATA ATCGTAATGG AAACTACGAT ATTTACATGA GCACTATTTC AAGTGAAGAA
CCAGAACCAA ACTTCCCTGT TGCTGACTTT TCGGCATCTC AAACCTCAGG AAAAACACCA
TTAAAAGTTA AATTTACTGA CACAAGCACA GGAACACCGA CAAAGTGGAT ATGGAACTTT
GGAGATGGTT CAAAGTCATT TCACCAGAAT CCGGTTCACA AGTATTCAAA GGCAGGAACA
TATACTGTTA GCTTAACAGT AAAGAATGCC GCAGGACGTA ACACGATAAC AAAAACAGAT
TATATAACCG TGGCAGCAAA ACCCGTTGCT GCATTCTCTG CATCTCCTAC TTCAGGAAAA
GTACCACTGA AGGTTAAGTT TACTGACACA AGCACAGGGA CACCTGTTAA ATGGAAATGG
AATTTTGGAG ATGGATCAAA GTCATTCCAC CAGAATCCAA CGCATAAGTA TTCCAAAGCA
GGAAAATACA CAGTAACTCT CAAAGTAACC AATGCGGCAG GCATCAACAC AGCAACAAAA
TCAAAGTATA TAACTGTGAC ATCAAAACCC GTTGCTGCCT TCTCTGCATC TCCAACCTCA
GGAAAATATC CATTAGACGT TAAATTTACG GACAAAAGTA CCGGATCACC AACGAAATGG
AAATGGGACT TTGGAGACGG AACAAAGTCA TTCCTTCAGA ATCCAACGCA TAAGTATTCC
AAAGCAGGAA AATACACAGT AACCCTTAAA GTAACCAATG CAGCAGGCAT CAACACAGCA
ACAAAATCAA AGTATATAAC CGTGACAGGA ACTTCGCAAG CTCCGACTGC AGATTTCTGG
GGCTGGCCAT TATCAGGAAA AGCTCCACTA AAGGTAACAT TCACAGAGAC GAGCAAAGGA
TCGCCAACCT CATGGAAATG GGATTTTGGA GATGGTAAAT ATTCAACAGA AAAGAGTCCA
ACACACACAT ATTCATCTGC AGGAACTTAC ACGGTTAAAC TCATAGCAAC AAATGAAGCC
GGAAGTAGTA CAAAATCAAA ATGGAAATAT ATAAAAGTGG CAAAGTGA
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| Protein sequence | MKKKETIYKI ILFSISLVLL LFPSAVSAAT AESGSPTITE TQITTNTSYQ WGPDIYGDRI
VWRDGRNGNS DIYMYDISTK KETRITTNTS DKWDPAIYGN RIVWVDDRNR SWDIYMYDLS
TKKETQISNY EFEFEDTGNP AVYGDKIVWT HGFEEYWQIY MYDLSTKKET QITTNGRAYY
PAIYGNKIVW LDDRDSDYNY DIYMYDLSTK KESQITTSGS ADNPAIYGNR IVYADDRKGN
YDIYMYDIST KAETQITSSP DNQVSPNIYG NRILWKDVGG EDDGGEYHGI YMCDLSTNQK
FKITSHGDWD DPAIYGNRVV YTDNRNGNYD IYMSTISSEE PEPNFPVADF SASQTSGKTP
LKVKFTDTST GTPTKWIWNF GDGSKSFHQN PVHKYSKAGT YTVSLTVKNA AGRNTITKTD
YITVAAKPVA AFSASPTSGK VPLKVKFTDT STGTPVKWKW NFGDGSKSFH QNPTHKYSKA
GKYTVTLKVT NAAGINTATK SKYITVTSKP VAAFSASPTS GKYPLDVKFT DKSTGSPTKW
KWDFGDGTKS FLQNPTHKYS KAGKYTVTLK VTNAAGINTA TKSKYITVTG TSQAPTADFW
GWPLSGKAPL KVTFTETSKG SPTSWKWDFG DGKYSTEKSP THTYSSAGTY TVKLIATNEA
GSSTKSKWKY IKVAK
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