Gene Mbar_A1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1474 
Symbol 
ID3627531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1814018 
End bp1815763 
Gene Length1746 bp 
Protein Length581 aa 
Translation table11 
GC content39% 
IMG OID637700362 
Productcell surface protein 
Protein accessionYP_305011 
Protein GI73668996 
COG category[R] General function prediction only 
COG ID[COG3291] FOG: PKD repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.12576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTA ACAAAAAATC GTATTCAGTG GTTATAGCAT CAGCAGTTCT GATTTTATTT 
TTGATTTTCG TTTCATCTAC GGCATCATCA GCTTCTCCAT CTGCAATCAC TGAAACTCGG
ATAACCAACC ATGGAACGGC ATCCAATCCA GATATCTATG GTGACAAGAT AGTGTGGCAG
GATAACCGCA ATGGAAACTG GGATATATAC ATATTTGATC TCTCCACCAA AATAGAAATT
CACACTACCA ATAAAACAGA TCAGATAAAT CCTGCTATTT ATAAAAATCT GGTAGTTTGG
GAGGATGAGC GCAACGGAGG TCATGACATT TACGTGGAAG ATCTCTCTAC AAAAATACAA
ACTTGTATCT CTAAAAGTGG AATGGCACAT AATCCTGCAA TCTATGGTAA TAGAATAGTG
TGGCAGGACG AACGTAATGG AAGTTCTAAT CTCTACATGT ACGATCTATC TACTAAAAAA
GAAACTCAGA TTACTACCAG CGGTAAAGCA TTTTATCCTT CTATATACGA TAATAGAATA
GTGTGGCAGG ACGAACGCGA TGGAGATTAT CGCCACCCTG ATATCTACAT GTACGATCTT
TCCAATAAGA AGGAGACTAA AATATCAACA ACAAAATTCA CCATTGGTGG TCATTACTCG
CCTACAATTT ACGGGAACAG GGTAGTGTGG GTAGGTGCCA CTACTGATTA TGATTACATT
TACGGTATTT ATGTAATGGA TCTCTCTACT AAAAAGCAAA ATATAATCCT TAAATCCACT
GATGAAATAG GCAACCCTAA AATCTACGGT GATGATATCG TATATTCTCT TGCTATGACT
GGCGATGGTT TTCCTGATAT CTATATGTAT AATCTCTCCA CTTCCGAGAG AAAAAAGATA
TCCACCAGTC AAACAGCGAA AGAGCCTGAT ATTTATGGTA ACAAAATAGT ATGGGTGGAC
TGGAGAAATG AAGGTCCTGA TATTTACATG GCTACTCTCG GTTCAGACCT CCCTGTAGTT
GCTTTTTCTG CATCCCCAAC TTCTGGGAAA ACACCATTAA ACGTTAAATT TACTGACACC
AGCACTGGCT CCCCAACTTC CTGGTTCTGG AACTTTGGAG ATGGTTCAAA GTCATTCCTC
CAGAATCCGG TTCATAAGTA TTCAAAAGCA GGAACATATA CTGTTAGCTT AACAGTAAAG
AATGCGGCAG GACGTAACAC GATAACAAAA TCAAAGTATA TAACCGTGAC AACAAAACCC
GTTGCTGCTT TCTCTGCATC TCCAACCTCA GGAAGAGTAC CATTAAAAGT TAAATTTACT
GACAAAAGTA CAGGAATACC AACGAAATGG AAATGGGATT TTGGAGACGG AACAAAGTCA
TTCCTTCAGA ATCCGACTCA TAAATATTCC AAAGCAGGAG AATACACAGT AACTCTCAAA
GTAACCAATG CAGCAGGCAT CAACACAGCA ACAAAATCAA AGTATATAAC CGTGACATCA
AAACCCGTTG CTGCCTTCTC TGCATCTCCA ACCTCCGGAA AATCCCCATT AAACGTTAAA
TTTACTGACA AAAGTACAGG GTCACCGACC AAATGGAAAT GGGATTTTGG AGATGGAACA
AAGTCATTCC ACCAGAATCC AATGCATAAG TATTCCAAAG CCGGAAAATA CACAGTAACC
CTCAAAGTAA CCAATGCGGC AGGCATCAAC ACAGCAACAA AAACAAAATA TATAACCGTG
ACATGA
 
Protein sequence
MKINKKSYSV VIASAVLILF LIFVSSTASS ASPSAITETR ITNHGTASNP DIYGDKIVWQ 
DNRNGNWDIY IFDLSTKIEI HTTNKTDQIN PAIYKNLVVW EDERNGGHDI YVEDLSTKIQ
TCISKSGMAH NPAIYGNRIV WQDERNGSSN LYMYDLSTKK ETQITTSGKA FYPSIYDNRI
VWQDERDGDY RHPDIYMYDL SNKKETKIST TKFTIGGHYS PTIYGNRVVW VGATTDYDYI
YGIYVMDLST KKQNIILKST DEIGNPKIYG DDIVYSLAMT GDGFPDIYMY NLSTSERKKI
STSQTAKEPD IYGNKIVWVD WRNEGPDIYM ATLGSDLPVV AFSASPTSGK TPLNVKFTDT
STGSPTSWFW NFGDGSKSFL QNPVHKYSKA GTYTVSLTVK NAAGRNTITK SKYITVTTKP
VAAFSASPTS GRVPLKVKFT DKSTGIPTKW KWDFGDGTKS FLQNPTHKYS KAGEYTVTLK
VTNAAGINTA TKSKYITVTS KPVAAFSASP TSGKSPLNVK FTDKSTGSPT KWKWDFGDGT
KSFHQNPMHK YSKAGKYTVT LKVTNAAGIN TATKTKYITV T