| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1473 |
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| Symbol | |
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| ID | 3627754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1811446 |
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| End bp | 1813485 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637700361 |
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| Product | cell surface protein |
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| Protein accession | YP_305010 |
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| Protein GI | 73668995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00112835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAACTTA ACACAAAATC GTATTCAGTG GCCTTAGCAT CAGCAGTTCT GATTTTATGT
TTAATTCTCG TTTCATCTAT TGCATCGGCG GTTACTGAGC AAACTGCTTC GCTCACTATC
AATGAAACTC CGATAACCAC CAGTGGATCA GCATGTTGTC CTTCTATATA TGGTGACAGG
ATAGTATGGG AGGACTGGCG TAATGGAAAC CAGAGTGATG GGCCCTCCAA TATTTATATG
TACAATATCT CCACTCAGAA GGAAACTCAA ATTACTACCA GTGGATCAGC AACGTCTCCT
TCTATCTATG GTAATAGGAT AATATGGCTG GATGGGCGCA ATGGAAATAG TCAGAATGAT
ACCGAGGGAG GACATGATGT ATACATGTAC GATCTCTCCA CTCACAAGGA GACTCGGATA
ACCAATAGCA CAATTCCTGA GGATGGATTC GCGTATGAAC TCAGGATCGC TATCTCCGGG
AACAGGATAC TGTATGGTGG CACATATAAT TATTGCATTT ATGATATCTC CACTCAGAAG
AAAACTTATC TCATCGATGT GCCAATAATC AATCCTGCTT TTTTTGGTAA CATAATAGTA
GGGGTATCTG ATATTGATGG ACGCCCAAGT AGTCTCACAA TGTACGATCT CTCCACTAAT
AAGGAAACTC TAATTACCAA CCGCGATTCA GCATTCAGTC CTGATATTGA CAATAACATT
ATAGTGTGGG CAGATTGGCG CATGGGAGAT GATGGAGATT ACCACTCCAA GATCTACATG
TATGATCTTT CTACTAAGAA GGAAACTCAA ATTGCCAACA ACGGATCAAT ATTTTATTAT
AGTCCTGCAA TCTTCAAGGA CAGGATAGTT TGGCTGGGTG ACCAATTTTA CATGTATAAC
CTCTCAACTC AAGAGGAAAC TCATACTAAT AGCACATCAA TTAGTCTAGG ATTTGATTTG
TATGGTGATA AGATAGTGTG GACGGATTGG GGCAATGAAA ATGAAAAACC CAATGTCTAC
ATGGGTACTC TCACCAGTTC AAACCTGCCG ACTGCTGCCT TCTCTGCATC TCCCACCTCA
GGAAAAGCCC CAATGAAAGT GCAGTTTACT GACACAAGTA CAGGAACACC TACTTCCTGG
TTCTGGAATT TTGGAGACGG ATCAAAGTCA TTCCTTCAGA ATCCGACTCA CAAGTATTCA
AAAGCAGGAG TATATACTGT TAGCTTAACA GTAAAGGATG CCGCAGGACG TAACACGGTA
ACAAAAACAG ATTATATAAC CGTGGCAGCA AAACCAGTTG CTGCTTTCTC TGCATCTCCA
ACCTCAGGAA AATATCCATT AAAAGTTAAA TTTACTGACA AAAGTACAGG AACACCGACA
AAGTGGATAT GGAACTTTGG AGATGGATCA AAGTCATTCC ACCAGAATCC GGTTCACAAG
TATTCAAAGG CAGGAACGTA TACTATTAGC TTAACAGTAA AGAATGCGGC AGGACGTAAC
TCGGTAACAA AAACAAAATA TGTAACCGTG ACATCAAAAC CCGTTGCTGC CTTCTCTGCA
TCTCCAACCT CAGGAAAATA TCCATTAAAC GTTAAATTTA CGGACAAAAG TACCGGAACA
CCCACGAAAT GGAAATGGGA CTTTGGAGAC GGAACAAAGT CATTCCACCA GAATCCAACG
CATAAGTATT CAAAAGCCGG AAAGTACACA GTAACCCTCA AAGTAACCAA TGCGGCAGGC
ATCAACACAG CAACAAAATC AAAGTATATA ACCGTGACAG GAACTTCGCA AGCTCCGACT
GCAGATTTCT GGGGCTGGCC ATTATCAGGA AAAGCTCCGC TAAAGGTAAA ATTTACGGAG
ACTAGCAAAG GATCACCAAC TTCATGGAAA TGGGATTTCG GAGATGGTAA ATCTTCAACA
GAAAAGAGTC CAACACACAC ATATTCAGCA GCAGGAACTT ACACGGTTAA ACTCATAGCA
ACAAATGAAG CCGGAAGTAG TACAAAATCA AAATGGAAAT ATATAAAAGT GGCAAAGTGA
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| Protein sequence | MELNTKSYSV ALASAVLILC LILVSSIASA VTEQTASLTI NETPITTSGS ACCPSIYGDR
IVWEDWRNGN QSDGPSNIYM YNISTQKETQ ITTSGSATSP SIYGNRIIWL DGRNGNSQND
TEGGHDVYMY DLSTHKETRI TNSTIPEDGF AYELRIAISG NRILYGGTYN YCIYDISTQK
KTYLIDVPII NPAFFGNIIV GVSDIDGRPS SLTMYDLSTN KETLITNRDS AFSPDIDNNI
IVWADWRMGD DGDYHSKIYM YDLSTKKETQ IANNGSIFYY SPAIFKDRIV WLGDQFYMYN
LSTQEETHTN STSISLGFDL YGDKIVWTDW GNENEKPNVY MGTLTSSNLP TAAFSASPTS
GKAPMKVQFT DTSTGTPTSW FWNFGDGSKS FLQNPTHKYS KAGVYTVSLT VKDAAGRNTV
TKTDYITVAA KPVAAFSASP TSGKYPLKVK FTDKSTGTPT KWIWNFGDGS KSFHQNPVHK
YSKAGTYTIS LTVKNAAGRN SVTKTKYVTV TSKPVAAFSA SPTSGKYPLN VKFTDKSTGT
PTKWKWDFGD GTKSFHQNPT HKYSKAGKYT VTLKVTNAAG INTATKSKYI TVTGTSQAPT
ADFWGWPLSG KAPLKVKFTE TSKGSPTSWK WDFGDGKSST EKSPTHTYSA AGTYTVKLIA
TNEAGSSTKS KWKYIKVAK
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