| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A1472 |
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| Symbol | |
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| ID | 3627753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | + |
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| Start bp | 1808933 |
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| End bp | 1810909 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637700360 |
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| Product | cell surface protein |
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| Protein accession | YP_305009 |
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| Protein GI | 73668994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.055223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATTA ACAAAAAATC GTATTCAGTG GTTATAGCAT CAGCAGTTCT GATTTTATTT
TTGATTTTCG TTTCATCTAC GGCATCAGCA GCTTCTCCAT CTGCAATCAC TGAAACTCGG
ATAACCAACC ATGGAACGGC ATCCAATCCA GATATCTATG GTGACAAGAT AGTGTGGCAG
GATAACCGCA ATGGAAACTG GGATATATAT ATATTTGATC TCTCCACCAA AACAGAAATT
CACACTACCA ATAAAACAGA TCAGATAAAT CCTGCTATTT ATGAAAATCT GGTAGTATGG
GAGGATGAGC GCAACGGAGG TCATGACATT TACGTGGAAG ATCTCTCTAC AAAAATACAA
ACTCGTATCT CTAAAAGTGG AGAAGCACAT AATCCTGCAA TCTATGGTAA TAGAATAGTG
TGGCAGGAAG AAAGTAATGG AAATTCGAAT ATCTACATGT ATGATATATC TACTAAAAAA
GAGACTCAGA TCACTACCAG TGGAACAGCG TACAAGCCTG ATATCCATGG GGATAAGATT
GCATGGTCTG ACGTTGAATA TATCATTGTG TACGATCTTT CCAATAAGAA GGAGACTAAA
ATACCAACAA GAGAATTCTC TGGTTATTAC TCGCCTACAA TTTACGGAAA CTGGGTAGTG
TGGATAGATG CCAATGATGA GTATGGTTGC GTTTACGGTG TTTATGTGAT GGATCTCTCT
ACTAAAAAGC GAAATGAACT TATGACCTTC GCTGATTATA TGAGCAACCC TAAAATCTAC
GGTGATAATA TTGTATATTC TCTTGCTGTA ACTGGCGGCC GTTACCCTGA TGTCTATATG
TATAACCTTT CCACTTCCGA GTTTAAAGAA ATATCCACTA GTGAAACAGC AGAAGAGCCT
GATATTTATG GTAACAAAAT AGTATGGGTG GACTGGAGAA ATGAAGGTCC TGATATTTAC
ATGGCTACTC TCGGTTCAGA CCTCCCTGTA GCTGCTTTTT CTGCATCTCC AACTTCTGGG
AAAACACCAT TAAACGTTAA ATTTACTGAC ACTAGCACTG GCTCCTCAAC TTCCTGGTTC
TGGAACTTTG GAGATGGTTC AAAGTCATTC CTCCAGAATC CGGTTCACAA GTATTCAAAA
GCAGGAACAT ATACTGTTAA ACTTACAGTA AAGAATGCGG TAGGCCGTAA CACGGTAACA
AAAGCAGATT ATATAAAAGT TGTAACAAAA CCCGTTGCTG CATTTTCTGC ATCTCCCACC
TCCGGAAAAT CTCCATTAAA CGTTAAATTT ACTGACAAAA GTACAGGAAT ACCTGCTAAA
TGGAGATGGG ATTTTGGAGA TGGAACAAAG TCATTCCACC AGAATCCAAC GCATAAGTAT
TCAAAAGCCG GAAAATACAC AGTAACCCTC AAAGTAACCA ATGCGGCAGG CATCAACACA
GCAACAAAAT CAAATTATAT AACCGTGACT GCAAAACCAG TTGCTGCCTT CTCTGCATCT
CCAACCTCAG GAAAATATCC ATTAAACGTT AAATTTACGG ACAAAAGTAC CGGATCACCC
ACGAAATGGA AATGGGATTT TGGAGACGGA ACAAAGTCAT TCCACCAGAA TCCAACTCAT
AAGTATTCAA AAGCCGGAAA ATACACAGTA ACTCTCAAAG TAACCAATGC GGTAGGCATC
AACACAGCAA CAAAATCAAA TTATATAACC GTGACAGGAA CTTCGCAAGC TCCGACTGCA
GATTTCTGGG GCTGGCCATT ATCAGGAAAA GCTCCTCTAA AGGTAAAATT TACGGAGACG
AGCAAAGGAT CACCAACCTC ATGGAAATGG GATTTCGGAG ATGGTAAATA TTCAACAGAA
AAGAGTCCAA CACACATGTA TTCATCTGCA GGAACTTACA CGGTTAAACT CATAGCAACA
AATGCAGCAG GAAGTAGTAC AAAATTAAAA TGGAAATATA TAAAAGTGGC AAAGTGA
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| Protein sequence | MKINKKSYSV VIASAVLILF LIFVSSTASA ASPSAITETR ITNHGTASNP DIYGDKIVWQ
DNRNGNWDIY IFDLSTKTEI HTTNKTDQIN PAIYENLVVW EDERNGGHDI YVEDLSTKIQ
TRISKSGEAH NPAIYGNRIV WQEESNGNSN IYMYDISTKK ETQITTSGTA YKPDIHGDKI
AWSDVEYIIV YDLSNKKETK IPTREFSGYY SPTIYGNWVV WIDANDEYGC VYGVYVMDLS
TKKRNELMTF ADYMSNPKIY GDNIVYSLAV TGGRYPDVYM YNLSTSEFKE ISTSETAEEP
DIYGNKIVWV DWRNEGPDIY MATLGSDLPV AAFSASPTSG KTPLNVKFTD TSTGSSTSWF
WNFGDGSKSF LQNPVHKYSK AGTYTVKLTV KNAVGRNTVT KADYIKVVTK PVAAFSASPT
SGKSPLNVKF TDKSTGIPAK WRWDFGDGTK SFHQNPTHKY SKAGKYTVTL KVTNAAGINT
ATKSNYITVT AKPVAAFSAS PTSGKYPLNV KFTDKSTGSP TKWKWDFGDG TKSFHQNPTH
KYSKAGKYTV TLKVTNAVGI NTATKSNYIT VTGTSQAPTA DFWGWPLSGK APLKVKFTET
SKGSPTSWKW DFGDGKYSTE KSPTHMYSSA GTYTVKLIAT NAAGSSTKLK WKYIKVAK
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