Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1441 |
Symbol | |
ID | 3626122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1774419 |
End bp | 1776275 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637700330 |
Product | hypothetical protein |
Protein accession | YP_304979 |
Protein GI | 73668964 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.232701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAGCAAG TAAATGCAAC TTACAGAGAC CTGAAAGTGG CTGACGTTCC TATATTCATA ACGTCGGATT CTCTCCTCCA CCTTTACCAT GTCCAGTTTG ATGAGACATT AAAAAGGGTC GAAGAAAATG AGTTTTACGA CGAGCTCTGG AGACTTGACA AAATGCTCCT TGAATCTTCC ATAGAAGATT ATAACGAGAT AAAAGAAAAC AGTTCTTCAT CTGATGAAGT AAAGGAAGCT GCAAGAAGAA ATGTTGCATA CTTTGCGGTT GCCCTTAGTT TGCTTGAAGA AAAACCAGAT CCAAATCGGA TACAGGTCAA GTCTACAGAG ACTTCAAGTT CCGAAGAATA TAGCTTTGAA GTCCCGAAAT ATGTGCAGGA AGATGTAGAG GCTGAACTCG CTTTGATAGA AGCTCAAAAA GAGGGAGTGT CTCCGATTTT CAAGTACAGT GAAGATTACT CTCAGTACAC TCCACGGGGA CACTATACAT CCTCTGAAAA ACTTCAGAAA TACTTCAAGG CCATGATGTG GCATGGTAGA ATGAGTATGC TACTTAAGCC GGACATGATT AATACAGAAG ACCCGGAAAA TGAAGCGAGA ATCCAGACTA TACAGGCTTT TTTGATTTCT GACCATTGTG ATAAGGACAA AAACCTCCGA GAGAGATGGG ACAGAATCTA TAACGTAACT GCTTTTTATG TCGGTTTTTC TGATGACCTC GGGCCCTATG AATATACAAA AGCTCTGGAT ACTGTTTTTG GGAATGATAG AAACGGAGTA AGTTTCGACA ACGAAAGTCT TACAGCACTG AAAACTGAAC TTGAAAAATA TGAAAGCCCA AAAATCTACA GCGGAACAGG GGAAATAATT CAGGCAGGCT CTGAAACCGA AAACAAAACT CTTGAGGCTA CAAAAGGGTT CAGATTCATG GGTCAGCGAT ATACTCCAGA CTCCTATATT CTCCAGAAGC TCCATCCTCC TGCCCTGAAC ATTATGGATC TCCTTGGTTC TGAAAGAGCC AGAGAACACC TGAAAAATCA GGGTATTTCT GAAAATGAAG AATACAAAAA AGCTCACACA TCTCTGGAAA ATGAATTTAG AGCTTTTGAT GAAGAAGACT GGAATAAAAA TCTATACTGG GCTCAACTGT ACGCTTTAAA GCCTCTCCTA ATAAGTTATC CAGAGGGTTA TCCTACATTT ATGCAGACTG AAGCCTGGGA AGATAAACAG CTTAATACAG CACTTGCTTC CTGGACCGAG CTCAGGCATG ATACCATCCT CTATGCAAAA CAGGCTCGTT ACACAGGTGT ACCCTATATT CCAGAAGAAA AGCCTGTTCA GGGATATGTG GAACCAGTTC CCGAATTCTA TTCCAGGATG CTTGCCCTTA CAAAAATGGC ACACAATGGG CTGGCTGAAA TGGAAGTACT TGACGAAAAA TCAGATAAAG AGTTCACAAC TCTTGAAAAC ACCCTTGAAA AGTTGCTGGA AATCTCGATA AAAGAGCTTG AAAACAAAGA GCTGACAGAT GCAGAGTATG AGTTCATCAG GAATTTTGGC CAGAATATAT CTCCAATGCT TGAGAACGTA GATGAGGATT CCCAGAGATC GGTCATGGTC GCGGATGTTT ACACCTCTCC TGCTGGAGTT TTGGAAGAAG GAACCGGAAA ACTGGACCTG ATAATAGTAG CTTATAAACA GCCCGATGGT AGGATTGTTC TTGGAGCAGG CCCTGTAATG AGTTATTATG AGTTCTGGCA GCCATCAGGA CAGAGGTTGA CAGATGAAGA ATGGAGAGAT ATGCTGAAAA ATAACCCTCC TGAAAGGCCG GAATGGGGTG AGTCTTTTAA GGTGTAA
|
Protein sequence | MEQVNATYRD LKVADVPIFI TSDSLLHLYH VQFDETLKRV EENEFYDELW RLDKMLLESS IEDYNEIKEN SSSSDEVKEA ARRNVAYFAV ALSLLEEKPD PNRIQVKSTE TSSSEEYSFE VPKYVQEDVE AELALIEAQK EGVSPIFKYS EDYSQYTPRG HYTSSEKLQK YFKAMMWHGR MSMLLKPDMI NTEDPENEAR IQTIQAFLIS DHCDKDKNLR ERWDRIYNVT AFYVGFSDDL GPYEYTKALD TVFGNDRNGV SFDNESLTAL KTELEKYESP KIYSGTGEII QAGSETENKT LEATKGFRFM GQRYTPDSYI LQKLHPPALN IMDLLGSERA REHLKNQGIS ENEEYKKAHT SLENEFRAFD EEDWNKNLYW AQLYALKPLL ISYPEGYPTF MQTEAWEDKQ LNTALASWTE LRHDTILYAK QARYTGVPYI PEEKPVQGYV EPVPEFYSRM LALTKMAHNG LAEMEVLDEK SDKEFTTLEN TLEKLLEISI KELENKELTD AEYEFIRNFG QNISPMLENV DEDSQRSVMV ADVYTSPAGV LEEGTGKLDL IIVAYKQPDG RIVLGAGPVM SYYEFWQPSG QRLTDEEWRD MLKNNPPERP EWGESFKV
|
| |