Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1431 |
Symbol | |
ID | 3627468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1760876 |
End bp | 1762447 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637700321 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_304970 |
Protein GI | 73668955 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0875304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTAT TAGTCAGCGA CTCACTCTCC AATGAAGGTT TGGAGATTCT AAAAGAACAC TTTAAGGTTG ATGTTTCCAC CGGGCTTTCC GAAGATGAGC TGGTGAAAAA AATTAAGGAT TACGATGCTC TTGTAATACG CAGCGGTACC CATGTTACTC AGAAAATAAT CGAAGCTGCC GACAACCTGA AAATTATCGG GAGAGCCGGA GTCGGAATTG ACAATGTTGA TGTGGATGCA GCTACAAAGA AAGGCATTAT TGTGGCTAAC TCTCCCGAAG GCAATATGAT TTCGGCAGCA GAGCACACAA TTGCTATGAT GATGGCAATG TCCAGGAACA TCCCCCAGGC AAATGCCTCC CTTAAAGGCA AGGAATGGAA ACGTAGTAAA TTCACAGGTG TCGAGGTCAA AGGTAAGACC CTAGGAATCA TAGGTCTCGG AAGAATCGGT TCCGAAGTCG CAAAAAGGGC TTCCGGACTT GAAATGAACC TGATGGGGTA TGATCCATTT GTTTCTGAAA AGCGGGCTAT TGAGCTTGGT GTCAAGCTGG CAACAGTTAA CGAAATCGCA AAAGAAGCCG ATTACATCAC AGTGCACACT CCTCTTATAA AAGAAACCAG AAACATTCTT GATGAAGAGC AGTTTGCCCT GATGAAGCCT ACAACCAGAA TTCTCAACTG TGCCCGCGGC GGCATTATCA ACGAAGAAGC TCTGGCAAAA GCTCTTGAAA GCGGAAAAAT AGCCGGTGCA GCAATAGACG TTTTCATTGA GGAGCCTCCT TTTAACAGCC CTCTTCTGAG CTTTGACAAT GTTGTAGTAA CCCCTCACCT TGGTGCTTCT ACAAAGGAAG CTCAGGTCAA TGTGGCAGTA GATATTGCAA AGGAAGTAGC GTCTGTCCTT ACAGGTGGAC CTGCAAAGAA CGCAATCAAT ATCCCCTCGG TAAAGCCGGA AGCTATGGCA GTCCTTGCCC CTTACATCAG GCTCTCAGAA ATTATGGGTA AGATTGCAGG GCAGCTCGTA GACGGAAACT ACGAAAAAGT CGAAATCGGA TATAACGGAG AGATTTCCGG AAAGGATACA AGGCCTCTTA CAGTCTCGGC TCTCAAAGGA CTGCTTGAAA TGGCCCTCGG TTCCGGAGTA AACTATGTCA ATGCTCCCAC TCTTGCAAAG TCCAGAATGA TTGCAGTCGT GGAAAGTAAA TCCGAATCTT CTGAGGAATA CTCTTCAACT ATCAGTATCA AACTTAGCAG CAACGGCAAG GAAAAGCTGG TTGCAGGTAC TGTTGTCGGA GACGATCCAA AGATCGTCGC AGTCGATGAT GACAGAGTAG ATATCTTCCC TGCAGGCCGT ATGATTTTTG CCAAACATAT CAACAGGCCC AACGTTATCG GACCTTGCTG CATGGTACTC GGTAAAAACA ATATCAATAT CTCAGGCATG CAGGTTGGCA GATCAGAAAT AGGAGGCGTG ACCATGATGG TTCTTAACAT AGACTCCGAA GTTTCTGACC CAATCCTTGA GGAAGTCCGG AAAGTCGATG GAATCCTGGA TGCCAAACTT GTGACACTCT AA
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Protein sequence | MKVLVSDSLS NEGLEILKEH FKVDVSTGLS EDELVKKIKD YDALVIRSGT HVTQKIIEAA DNLKIIGRAG VGIDNVDVDA ATKKGIIVAN SPEGNMISAA EHTIAMMMAM SRNIPQANAS LKGKEWKRSK FTGVEVKGKT LGIIGLGRIG SEVAKRASGL EMNLMGYDPF VSEKRAIELG VKLATVNEIA KEADYITVHT PLIKETRNIL DEEQFALMKP TTRILNCARG GIINEEALAK ALESGKIAGA AIDVFIEEPP FNSPLLSFDN VVVTPHLGAS TKEAQVNVAV DIAKEVASVL TGGPAKNAIN IPSVKPEAMA VLAPYIRLSE IMGKIAGQLV DGNYEKVEIG YNGEISGKDT RPLTVSALKG LLEMALGSGV NYVNAPTLAK SRMIAVVESK SESSEEYSST ISIKLSSNGK EKLVAGTVVG DDPKIVAVDD DRVDIFPAGR MIFAKHINRP NVIGPCCMVL GKNNINISGM QVGRSEIGGV TMMVLNIDSE VSDPILEEVR KVDGILDAKL VTL
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