Gene Mbar_A1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1413 
Symbol 
ID3627058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1741378 
End bp1742334 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content35% 
IMG OID637700302 
Producthypothetical protein 
Protein accessionYP_304952 
Protein GI73668937 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00553932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0166848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAA ATAAGATATG GATGATAGTT CTTTTTACAA TTATAGTTTA CATTATAATG 
GGAGTATATG CTGATTTTGG AAAATTGTCC CTTACTATAT CCGAATTCCG ATGGCAGTAC
TTTCTCCTTT TGATAGGCCT AACTACAGTA GGTTATTTTA TTAGGTATAT CAAATGGGAT
CTTTTTCTGA GAGCTACAGG TTTACACCTT GATTATAAAG AAAATCTCTT CATATTTTTC
AGTGGACTTT CAATGATTGT AACTCCAGGC AAGTTAGGTG AAATCTGGAA AAGCTGGCTT
ATTAAAGATA TTTCTGGGGA AGAATTAAGC AAAACTCTTC CTGTTGTAAT TATGGATCGA
GTGACCGACA TAGTAAGTCT GGTACTTCTT TCTTTTCTGG GTATTTTTTA CTACAGAAAA
GGAATTTCTT TTCTAATCGT TCTTTCTATT TGCTGCATAG GATTTTACAT TGCCATAAGA
TCACAGTCAA TTTCTGGTAA AATGAAAAAA GTTCTTGAGA AAAAATTTAG TAAGTATACA
ACTGATATGC AATTGATGCA CGAAACTATG AATAAAATAA CAGAGCCCAA AATCTTTGCT
TCGCTATCCC TGTTGAATAT TCTTGCGTGG TTTTTCGAGT GCATGGGACT TTATTATGTA
GTCATCGGTT TTGGGCATTA CATAAAGATT TCACTCTCAA CGTTTATATT CAGTTTTTCC
TCCCTAGCAG GAGGAATGAG CATGGTTCCT GGGGGTATAG GAGTGGCAGA GGCAGGTATA
TCAGGGCTTT TAATTTTAAA CGGTATTTCT CCAGCACTGT CTGTTGGAAT AGCCCTGATT
CTCCGACTTG GATCCTTCTG GTATGGAGCA CTTTTAGGAT TTACAGTTCA TATGATATTT
AAAAAGAAAT TTATGAGAAC TAAGGAAAAT TTAGGTGACG GAGTTAAAAA TGTCTAA
 
Protein sequence
MAKNKIWMIV LFTIIVYIIM GVYADFGKLS LTISEFRWQY FLLLIGLTTV GYFIRYIKWD 
LFLRATGLHL DYKENLFIFF SGLSMIVTPG KLGEIWKSWL IKDISGEELS KTLPVVIMDR
VTDIVSLVLL SFLGIFYYRK GISFLIVLSI CCIGFYIAIR SQSISGKMKK VLEKKFSKYT
TDMQLMHETM NKITEPKIFA SLSLLNILAW FFECMGLYYV VIGFGHYIKI SLSTFIFSFS
SLAGGMSMVP GGIGVAEAGI SGLLILNGIS PALSVGIALI LRLGSFWYGA LLGFTVHMIF
KKKFMRTKEN LGDGVKNV