Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1352 |
Symbol | |
ID | 3627425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1666575 |
End bp | 1667273 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637700242 |
Product | hypothetical protein |
Protein accession | YP_304893 |
Protein GI | 73668878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00554372 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCAG AAAATATTAA GCTCAAAACT CTTGAAATGA CCTTTGAAGG CTCAGAAGAG TTCAGGGGGG ACGCAAATCA GATACGTGGT TTCTTTGCGT CAAAATTCAA TGAATACGAT CAGCTCCACA ACCATAACAC TGACAGATAT TATTACCGTT ACCCTCTTGT GCAGTACAAA GTTCTTGATA GGATGCCGCT AGTGGTTGGT ATAAATGAAG GAGCAGAAAT TTTAAAATGT TTATTTGATA AATTTGATAC GGTTACTCTT CCTCATGAGG ACTTTGAAAT CACTGAAAGG TCTCTGAGGC TTAAAAAACA GGATTTTGGC CTCACAAAAA ACCTCTACTT TTACGAATTT CTCACTCCCT GGCTTGCCCT TAATAAAGAA AATGAAGAAA AGTTCTTTGA GACCAGAAAG ACTGAAGAAA AAAAGGAAAT CCTCAGGAAG ACGCTTGTAG GAAATTTGCT TTCCATGTCA AAAGCTTTTG GATATACGGT TCCTGATACC ATAAAATGCG ATGTTGATGT GGAAGTCAGA TGTTCAAAGT ACAAAAATAT GGATTTTACT TCTTTTACAG GCGGTTTTAT AGCTAATTTT TTGATCCCGG ATTTTATGGG AGTGGGAAAG GGGGTTGCTA AGGGGTTTGG GACTGTGAGG AAAATAACAG AAAATCGAAG GAAATTGGAA TCATTATAA
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Protein sequence | MTPENIKLKT LEMTFEGSEE FRGDANQIRG FFASKFNEYD QLHNHNTDRY YYRYPLVQYK VLDRMPLVVG INEGAEILKC LFDKFDTVTL PHEDFEITER SLRLKKQDFG LTKNLYFYEF LTPWLALNKE NEEKFFETRK TEEKKEILRK TLVGNLLSMS KAFGYTVPDT IKCDVDVEVR CSKYKNMDFT SFTGGFIANF LIPDFMGVGK GVAKGFGTVR KITENRRKLE SL
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