Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1338 |
Symbol | leuD |
ID | 3627450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1650017 |
End bp | 1650505 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637700229 |
Product | 3-isopropylmalate dehydratase small subunit |
Protein accession | YP_304880 |
Protein GI | 73668865 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA GAGCCTGGAA GTTCGGAGAC GACGTGGATA CGGATGCAGT GATTCCCGGA AGGTACTTGA TTTACAATAC CCCTGAAGAG CTTGCAAAGT ACACGTTTGA AGGTGTACGC CCCGAATTTG CAAAAAAAGT TCATGAAAAT GATATCGTAG TCGCGGGAAA CAATTTTGGT TGCGGCTCAT CGCGTGAGCA CGCGCCCCTT GCCCTGAAAG GAGCAAAGGT AGCCTGTGTA ATTGCAAAAT CTTTTGCAAG GATCTTTTTC AGGAACTCAA TAAATATCGG AGTTCCTGTC CTGGAATGCC CTGATACTGA CAGGATTGAC GATGGAGACG AGCTTGAAGT AGACCTGTCC ACAGGAGTTA TTGAAAACAA GACAAAAGGT GAAACCTACC AGGCAACCCC TCTCCCTGAT TTCGTGCGTG AAATCGTGGA TGAGGGTGGA CTTATCGAAT ATGCCAGGAA ACTGGTCTCT GAACGCTAA
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Protein sequence | MKGRAWKFGD DVDTDAVIPG RYLIYNTPEE LAKYTFEGVR PEFAKKVHEN DIVVAGNNFG CGSSREHAPL ALKGAKVACV IAKSFARIFF RNSINIGVPV LECPDTDRID DGDELEVDLS TGVIENKTKG ETYQATPLPD FVREIVDEGG LIEYARKLVS ER
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