Gene Mbar_A1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1327 
Symbol 
ID3627439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1638034 
End bp1639050 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content39% 
IMG OID637700218 
Producthypothetical protein 
Protein accessionYP_304869 
Protein GI73668854 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0232591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGC CAGAAATATC GATCATCATT CCACTCTATA ATAAAAGTAT CCATATCGCA 
CGGGCATTGA ATTCGGTTCT TAACCAGACA TTCTATAACT TTGAGGTAAT TGTTGTGGAC
GATGGTTCTA CAGACGGTGG AACGAAGATT GTTATGGATT TCAATGACCC TCGGATTCGT
TTGATCCAAC AGAAAAATCA GGGCGCATCG ATAGCAAGAA ATGTGGGTGT CCAGTATGCT
AAAGCAAATC TGATTGCTTT TCTGGATGCA GATGATGAAT GGACACAAAA CTACATAGAA
ATAATCTTGA AATTGAGAAA GCGATACCCT CAAGCTGGTA TGTATACTAC AGCTTACCAA
ATATCGACCC ACGATGGAAA GCTTACTTGG CCCAAATATA AATATATACC TTTTCGATCA
TGGGAAGGAC TACTCCCCAA CTTCTTCAAA TCTTTAGCTT TTGGAGATTC TCCAGTCCGT
ACTTCTTTAT TATCCGTCCC CAAGAGTATT TTTATAGAAT TGGGTGGGTT CCCACCGGGA
TATAGATGGG CACATGATGT TGATTTGTTC GGGAAAATTG CACTGAAATA TCCAGTTGCT
TTTAGTTGGA AACTAGGGGG CATATATCAC GGGGACGCAG TTAATCGCCT TAGTGATCTA
AAACGTCCAA TAGACTATGA TGAGCCGTTT ATCGAGACTG CTCGTAATGC TATAATAAAT
GGGGAAGTTC GGCCTGATTT TATTGGGCCA CTCAATGAAT TCATCTTCAG ACAGGAGACC
CCTCGTGTTG CAAGATATAT ACTGTCAGGA AACTCAGAAA CCGCCCGAAA TATCTTAAGT
CAGTGTAAAC CGAAGCAATA CTATTACTAC TCCATGAAGA TATTATTGCT CCTATTATCA
ATAATACCTT ATCCTGTAAT TAGATACTCA ACCAATATAA AGTTTTTAAA AATAGCTTTA
ATGGAATTAT TTCATATCTC ACCAGAGGCA AAGTACTCAC AGGGTCTCTA TCGTTAA
 
Protein sequence
MIVPEISIII PLYNKSIHIA RALNSVLNQT FYNFEVIVVD DGSTDGGTKI VMDFNDPRIR 
LIQQKNQGAS IARNVGVQYA KANLIAFLDA DDEWTQNYIE IILKLRKRYP QAGMYTTAYQ
ISTHDGKLTW PKYKYIPFRS WEGLLPNFFK SLAFGDSPVR TSLLSVPKSI FIELGGFPPG
YRWAHDVDLF GKIALKYPVA FSWKLGGIYH GDAVNRLSDL KRPIDYDEPF IETARNAIIN
GEVRPDFIGP LNEFIFRQET PRVARYILSG NSETARNILS QCKPKQYYYY SMKILLLLLS
IIPYPVIRYS TNIKFLKIAL MELFHISPEA KYSQGLYR