Gene Mbar_A1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1286 
Symbol 
ID3627773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1593420 
End bp1594532 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content43% 
IMG OID637700176 
ProductABC transporter, solute-binding protein 
Protein accessionYP_304829 
Protein GI73668814 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA AAATATATAG TATAGTGCTT CTCCTCCTCC TGCTTCCAGT TGTTATGCTC 
TGTGGATGTG TAGAAAATAC GGATCAACAG GCTGTACTAA ACTCAAGCAC TGAGCTTCAG
AATTCAAGTA CCGTGCAAAT CACCGACATG CTGGGAAGGC AGTTAACTGT GCCTGCGGAA
ATATCCTCGA CTATAGGTAC TTCTTCACCT TCCGCCATCC TTGTGTATAT GCTTGCACCG
GATAAACTTG CAGGCTGGAA CTCCAAACAA AATTTCACCC AACCCTTCAT GGATGAAAAT
TACTCAAATC TACCTGTAAT AGGAAACTGG TTAGGAAGCA AGACCGGAAA TTATGAAACT
GTAATTGATA TGCATCCTGA CATTTTTATT GAAAGCACAG CCACAAATGG AAAAACTAAT
GAAGCTATAG AACGCAGGCA GGAAAATCTT GGCAGCATTC CGGTAGTGGC TATTAATGAT
TCTATTCTTT TTGTGACACA ATCCGATCCT ACTATTGAAT ATGTGGGCAA ACTGCTTAAC
TGTGAATCCC AGGCAAAAAA ACTGATTGAA TTCCGCAGTT CTATTCTTAA TGAAATCAAC
AGTACTGTAA AAGACATTCC TGAAGACCAG AAAGTACGTG TTTATTATGC CGAAGGCCCA
AAAGGGCTAA TGACCGATCC TTCAGGCTCG CAACATTCTC AGGTAATTGA TATCTGTGGA
GGTATCAACG TTGCCGACTG TCCCCTCACG TCCGGAAGCG GCATGACTCA GGTCTCAATC
GAGCAGGTTA TGAATTGGAA CCCTGAGGTA ATTATCACGT CAAATCCACA GTTCTATTCG
ACAGTTTACT CTGATTCTCT CTGGGCAAGT ATGGATGCTG TGAAAAATAA GAAAGTATAC
CTTGCTCCTC AGAATCCTTT CTGCTGGATT GACAGACCGC AGGGCCCTCA CCTTATTCTA
GGAACTGCCT GGACTGCAAA AATGCTGTAT CCAGACCGTT TTGCAAATAT GGACCTCTCC
AAGCTGACAC GTGAGTTCTA CTCGGAGTTC TTCCACTACG ACCTTAAGGA TGAAGAACTT
AACACGCTCC TTAACCCTGC AACTAAAACC TGA
 
Protein sequence
MNRKIYSIVL LLLLLPVVML CGCVENTDQQ AVLNSSTELQ NSSTVQITDM LGRQLTVPAE 
ISSTIGTSSP SAILVYMLAP DKLAGWNSKQ NFTQPFMDEN YSNLPVIGNW LGSKTGNYET
VIDMHPDIFI ESTATNGKTN EAIERRQENL GSIPVVAIND SILFVTQSDP TIEYVGKLLN
CESQAKKLIE FRSSILNEIN STVKDIPEDQ KVRVYYAEGP KGLMTDPSGS QHSQVIDICG
GINVADCPLT SGSGMTQVSI EQVMNWNPEV IITSNPQFYS TVYSDSLWAS MDAVKNKKVY
LAPQNPFCWI DRPQGPHLIL GTAWTAKMLY PDRFANMDLS KLTREFYSEF FHYDLKDEEL
NTLLNPATKT