Gene Mbar_A1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1279 
Symbol 
ID3627766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1586067 
End bp1586828 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content45% 
IMG OID637700169 
ProductUbiE/COQ5 methyltransferase 
Protein accessionYP_304822 
Protein GI73668807 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCC ATGAAAACCA GATCAAACAG ACAATTGCCC GCATATGGGA CGTTTCGTCC 
GAGACCTATG ACAGCTATGA AGGGCATGGG ATTAAGAGTG AAGTTGAAAG AGAAGCCTGG
AAAAACGTGT TTAAAAACCT GCTTCCTCCA GGCAGGCTGA AGGTGCTTGA CGTAGGCTGC
GGGACCTGCG AAATTGGGCT GCTGTTTGCT GAAATGGGAC ATCATGTTAC GGGCCTTGAC
CTTTCAAAAA AAATGCTTGC AAAAGCCAGG GACAAAGCTT CCAGAAGAGG GTTTGACAGT
GTTTTCAAAA AAGGGGATGC CGAGGCTCCT CCTTTTAAGG CTGGGTCATT TGATGTAGTT
GTCAACCGCC ATCTCCTCTG GACCCTTCCT CACCCTGATA CTGCGGTCCA AAACTGGAAA
AAAGTGCTTG TGGGAGGAGG AAAGCTTATT GTTATTGATG GCATCTGGAA TGACGGTTCA
ATCGAAACAA ACGCAAGGAG GTTTGTAAGC GATTTCCTCA CTTTGCTTGT TGAAAGAAGG
AATCCCAGAA AAGGACATTA CTCTAGAGAG GTAGACAGTG AACTTCCAAA TAAGCAAGGA
GTCCCTCCTG AAAAAATGCT TGAATACTTC AGGGCTGCGG GATTCAAAAA TATAAAAGAT
ATCGACCTGA AAGATATCAT GGATCTTCAG AGAGAGAACA TGCCGTTCAG GAAACGGATA
GCTTATGACT ACAAATATCA TTTAATCTAC GGAGAAAAGT GA
 
Protein sequence
MTIHENQIKQ TIARIWDVSS ETYDSYEGHG IKSEVEREAW KNVFKNLLPP GRLKVLDVGC 
GTCEIGLLFA EMGHHVTGLD LSKKMLAKAR DKASRRGFDS VFKKGDAEAP PFKAGSFDVV
VNRHLLWTLP HPDTAVQNWK KVLVGGGKLI VIDGIWNDGS IETNARRFVS DFLTLLVERR
NPRKGHYSRE VDSELPNKQG VPPEKMLEYF RAAGFKNIKD IDLKDIMDLQ RENMPFRKRI
AYDYKYHLIY GEK