Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A1231 |
Symbol | |
ID | 3624279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1522708 |
End bp | 1524477 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637700121 |
Product | alkaline phosphatase |
Protein accession | YP_304777 |
Protein GI | 73668762 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1785] Alkaline phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.21484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACTA AGGAAACTGA TACTTTATTA ATTATTATAG TAACAGGACT TTTGCTGCTT GGAACTGTTG GTTCTGCAGC CGCTGCACAA TTTGGTTCGA ATTCTAGCGT AAACTTCACG AATTCTACTA ACTGCAAATT TCCTGTAACG CCGGAAGCTA AAATAAAGAA CGTGATTGTC CTGATTCCTG ATGGTTGTTC CCAAAGTGTG GAGACTTTAG CTCGCTGGTA TAGTGGAAAG CCTCTTGAGC TTGACAATAT GGTGACTGGA ACGGTTTCTA CTTATAGCAC TGATTCAGTC ATTACCGACT CTTCTTCAGC TGCAACCGCA TTTGCTGCGG GATATAAAAC TACTAACGGT TTTTTAAGCG TTGGACCAAG CAATAGTTCT GTGTTAAGTA CACTGGAAAT TCCACCTGAA GAACTGCAGT ACAGACCACT TGCAACAGTA CTTGAAGGCT CAAAGCTAGA AGGCAAAGCT ACAGGACTTG TAGCAACCTC TCGTGTGAGC CATGCCACAC CTGCAGCTTT TGCTGCTCAC GTTGATAACA GAGATAATGA AACCGAAATC ATGAAACAGA TGGTTTATGA AAACGTTGAT GTGATTTTTG GTGGCGGTTC AAGTTATCTC GTACCTGTAG CCGAGGGAGG AAAAAGGACT GACGGAGAAA ACCTGACAAA AGTACTTCTT GACAGAAACT ACCAGTATGT TGACAGCAGA GATCAGATGA TGAACCTGAC CACTGGCAAG GTATGGGGTC TTTTTGCCAG TAGCCACATG ATGCCGGATA TCGATCGCTC CTCACTTGCA CCTGAACAGC CTTCTCTTGC AGAAATGACC AATAAGTCCA TTGAACTGTT ATCTCAGGAT AAAAATGGCT TCTTCTTAAT GGTCGAAGGC AGCCAGGTTG ACTGGGCAGA TCACGCCAAT GATCCTAACT ATGCTGTAAC CGATTTTCTG GCTTTTGATA AAGCTGTTAA GGTTGCAGTT GACTTTGCTA AAAAGGACGG ACATACTCTA GTCCTAGCTT CCCCGGATCA TAATACAGGC GGCATGACTA TTGGCAGCAA CTCTGACTCC AATTATACAT CCACAACCGT AGAAGATGTC ATTGAGCCTC TCAAGGGTAT GAAACTCAGT TCCACAGGTC TTGAGACAAA AATAGGGACT AATCTTTCAT CTGAAAATAT CAAAAAACAG TTAAAAAACT GGTGGAGCAT TGATGCTACT GATGAAGATA TAGCTGAAAT TCTTAAGCTC TACAACGATG GAAAAGGCCT CTCACTTGAC TATGCAATTA GTGAGGTAAT CAGCCGCAAT CACACAGTAA TTGGCTGGAC TACTCATGGA CATTCCGGAG ACGATGTCCC TCTGTGGGCG TATGGTCCTA ACGATCTAAC AGGCCATGTT GACAATACAG AAATTGCAGG ACACATAGCT AAAGAACTCG GATTTGACCT TAACAAGACT AACTCGCATC TCTTTATTGA TGTGGGTAAG GTTTTCTCCA AAGATAACGG AGATGGAAAA CTGGATAAAA ATGAATACCT GCTAAATATG ACAAATTCCT CAAACCCTGT GCTGGAAATT GGAGATGCAA AACTGCCAGT GGACACGAAT ATTCTTATCA AGAATGGCGT AGCGCATGAG TTAGAAGGAA TAGTCGTCTA CGCTCCAGCA ACTGATAAAG TCTATATTCC CTGTGAAGCA CTTTCACTTG TAAATGGAAC AAAAATTAAT GTAACTCAAA AAGCAGCCGA AACTGCCTGA
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Protein sequence | METKETDTLL IIIVTGLLLL GTVGSAAAAQ FGSNSSVNFT NSTNCKFPVT PEAKIKNVIV LIPDGCSQSV ETLARWYSGK PLELDNMVTG TVSTYSTDSV ITDSSSAATA FAAGYKTTNG FLSVGPSNSS VLSTLEIPPE ELQYRPLATV LEGSKLEGKA TGLVATSRVS HATPAAFAAH VDNRDNETEI MKQMVYENVD VIFGGGSSYL VPVAEGGKRT DGENLTKVLL DRNYQYVDSR DQMMNLTTGK VWGLFASSHM MPDIDRSSLA PEQPSLAEMT NKSIELLSQD KNGFFLMVEG SQVDWADHAN DPNYAVTDFL AFDKAVKVAV DFAKKDGHTL VLASPDHNTG GMTIGSNSDS NYTSTTVEDV IEPLKGMKLS STGLETKIGT NLSSENIKKQ LKNWWSIDAT DEDIAEILKL YNDGKGLSLD YAISEVISRN HTVIGWTTHG HSGDDVPLWA YGPNDLTGHV DNTEIAGHIA KELGFDLNKT NSHLFIDVGK VFSKDNGDGK LDKNEYLLNM TNSSNPVLEI GDAKLPVDTN ILIKNGVAHE LEGIVVYAPA TDKVYIPCEA LSLVNGTKIN VTQKAAETA
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