Gene Mbar_A1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A1231 
Symbol 
ID3624279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp1522708 
End bp1524477 
Gene Length1770 bp 
Protein Length589 aa 
Translation table11 
GC content42% 
IMG OID637700121 
Productalkaline phosphatase 
Protein accessionYP_304777 
Protein GI73668762 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.21484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTA AGGAAACTGA TACTTTATTA ATTATTATAG TAACAGGACT TTTGCTGCTT 
GGAACTGTTG GTTCTGCAGC CGCTGCACAA TTTGGTTCGA ATTCTAGCGT AAACTTCACG
AATTCTACTA ACTGCAAATT TCCTGTAACG CCGGAAGCTA AAATAAAGAA CGTGATTGTC
CTGATTCCTG ATGGTTGTTC CCAAAGTGTG GAGACTTTAG CTCGCTGGTA TAGTGGAAAG
CCTCTTGAGC TTGACAATAT GGTGACTGGA ACGGTTTCTA CTTATAGCAC TGATTCAGTC
ATTACCGACT CTTCTTCAGC TGCAACCGCA TTTGCTGCGG GATATAAAAC TACTAACGGT
TTTTTAAGCG TTGGACCAAG CAATAGTTCT GTGTTAAGTA CACTGGAAAT TCCACCTGAA
GAACTGCAGT ACAGACCACT TGCAACAGTA CTTGAAGGCT CAAAGCTAGA AGGCAAAGCT
ACAGGACTTG TAGCAACCTC TCGTGTGAGC CATGCCACAC CTGCAGCTTT TGCTGCTCAC
GTTGATAACA GAGATAATGA AACCGAAATC ATGAAACAGA TGGTTTATGA AAACGTTGAT
GTGATTTTTG GTGGCGGTTC AAGTTATCTC GTACCTGTAG CCGAGGGAGG AAAAAGGACT
GACGGAGAAA ACCTGACAAA AGTACTTCTT GACAGAAACT ACCAGTATGT TGACAGCAGA
GATCAGATGA TGAACCTGAC CACTGGCAAG GTATGGGGTC TTTTTGCCAG TAGCCACATG
ATGCCGGATA TCGATCGCTC CTCACTTGCA CCTGAACAGC CTTCTCTTGC AGAAATGACC
AATAAGTCCA TTGAACTGTT ATCTCAGGAT AAAAATGGCT TCTTCTTAAT GGTCGAAGGC
AGCCAGGTTG ACTGGGCAGA TCACGCCAAT GATCCTAACT ATGCTGTAAC CGATTTTCTG
GCTTTTGATA AAGCTGTTAA GGTTGCAGTT GACTTTGCTA AAAAGGACGG ACATACTCTA
GTCCTAGCTT CCCCGGATCA TAATACAGGC GGCATGACTA TTGGCAGCAA CTCTGACTCC
AATTATACAT CCACAACCGT AGAAGATGTC ATTGAGCCTC TCAAGGGTAT GAAACTCAGT
TCCACAGGTC TTGAGACAAA AATAGGGACT AATCTTTCAT CTGAAAATAT CAAAAAACAG
TTAAAAAACT GGTGGAGCAT TGATGCTACT GATGAAGATA TAGCTGAAAT TCTTAAGCTC
TACAACGATG GAAAAGGCCT CTCACTTGAC TATGCAATTA GTGAGGTAAT CAGCCGCAAT
CACACAGTAA TTGGCTGGAC TACTCATGGA CATTCCGGAG ACGATGTCCC TCTGTGGGCG
TATGGTCCTA ACGATCTAAC AGGCCATGTT GACAATACAG AAATTGCAGG ACACATAGCT
AAAGAACTCG GATTTGACCT TAACAAGACT AACTCGCATC TCTTTATTGA TGTGGGTAAG
GTTTTCTCCA AAGATAACGG AGATGGAAAA CTGGATAAAA ATGAATACCT GCTAAATATG
ACAAATTCCT CAAACCCTGT GCTGGAAATT GGAGATGCAA AACTGCCAGT GGACACGAAT
ATTCTTATCA AGAATGGCGT AGCGCATGAG TTAGAAGGAA TAGTCGTCTA CGCTCCAGCA
ACTGATAAAG TCTATATTCC CTGTGAAGCA CTTTCACTTG TAAATGGAAC AAAAATTAAT
GTAACTCAAA AAGCAGCCGA AACTGCCTGA
 
Protein sequence
METKETDTLL IIIVTGLLLL GTVGSAAAAQ FGSNSSVNFT NSTNCKFPVT PEAKIKNVIV 
LIPDGCSQSV ETLARWYSGK PLELDNMVTG TVSTYSTDSV ITDSSSAATA FAAGYKTTNG
FLSVGPSNSS VLSTLEIPPE ELQYRPLATV LEGSKLEGKA TGLVATSRVS HATPAAFAAH
VDNRDNETEI MKQMVYENVD VIFGGGSSYL VPVAEGGKRT DGENLTKVLL DRNYQYVDSR
DQMMNLTTGK VWGLFASSHM MPDIDRSSLA PEQPSLAEMT NKSIELLSQD KNGFFLMVEG
SQVDWADHAN DPNYAVTDFL AFDKAVKVAV DFAKKDGHTL VLASPDHNTG GMTIGSNSDS
NYTSTTVEDV IEPLKGMKLS STGLETKIGT NLSSENIKKQ LKNWWSIDAT DEDIAEILKL
YNDGKGLSLD YAISEVISRN HTVIGWTTHG HSGDDVPLWA YGPNDLTGHV DNTEIAGHIA
KELGFDLNKT NSHLFIDVGK VFSKDNGDGK LDKNEYLLNM TNSSNPVLEI GDAKLPVDTN
ILIKNGVAHE LEGIVVYAPA TDKVYIPCEA LSLVNGTKIN VTQKAAETA