Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0936 |
Symbol | |
ID | 3627316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | - |
Start bp | 1134460 |
End bp | 1135074 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637699824 |
Product | endonuclease III |
Protein accession | YP_304488 |
Protein GI | 73668473 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.324146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATTG ATGAACTCAT GAAGAGGCTC TTTGAACTTT ATCCTGAAGC TTCTAACGAT GGCTTTACAG ATCCTTTTTT TGCGTTAATT TCTACTGTGA TGTCCCACAG AACCCGGGAT GATGTGACCT ATCCAGCGGC TAGCAAGCTT TTTGAGAGAT TTTCGACTCC TGAAGAAATG GTGAGAGCTG ATGTTAGCGA GATTGAAACT CTTATAAAAG ATGTGGGCTT TTACAGAGTT AAAGCAGGAA GAATAAAGGA AATTTCCAGA CTTCTTCTAG AAAAATATGG TGGCAGGGTT CCTGACGATA TGGAAGCTCT TCTTGAACTG CCTGGAGTCG GCAGGAAGAC TGCCAACTGC GTGCTTGCCC ATGCTTTTCT CAAGGATGCC CTTGCCGTGG ACACTCATGT CCACAGGATT TCTAACAGGC TAGGTCTAGT AGAGACAAAA GTCCCTGAAG AAACTGAAAC CGAATTAAAA AAGATCTTTC CACAGAAATA TTGGAGACAT GTAAATCTCT TGCTCGTAAA ATTAGGGCAA AATACCTGCC GGCCTATTTC TCCAAGGTGC AAAACATGTA CTCTTGATGA TATCTGTCCT AAAATTCTCC TTTAA
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Protein sequence | MDIDELMKRL FELYPEASND GFTDPFFALI STVMSHRTRD DVTYPAASKL FERFSTPEEM VRADVSEIET LIKDVGFYRV KAGRIKEISR LLLEKYGGRV PDDMEALLEL PGVGRKTANC VLAHAFLKDA LAVDTHVHRI SNRLGLVETK VPEETETELK KIFPQKYWRH VNLLLVKLGQ NTCRPISPRC KTCTLDDICP KILL
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