Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbar_A0922 |
Symbol | |
ID | 3627302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanosarcina barkeri str. Fusaro |
Kingdom | Archaea |
Replicon accession | NC_007355 |
Strand | + |
Start bp | 1115729 |
End bp | 1116457 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637699811 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_304475 |
Protein GI | 73668460 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCATA TTGGCCAGCT TGACCTTGAG AAAAAAGCTG CCGTTGTAGC AGTAATCCTT GAAAAATCCC TTGAAATTTC AAGAAAGGCC GCCAAAATGG GGGCCGACCT TCTCGAAATT CGGCTTGATT TGCTTGGGAT CAGGGACCTG GAAACAGCTG CAGAAACAAT CAGAAAAGTA AAATCCGAAA CCGGACTTCC GGTAATTCTC ACAAATCGCT CAATTACGGA AGGAGGAAAA TGGGAAGGAA AAGAGGCCGA TAGAATTGAA CTTCTTACAA ATCTCATTTC CCTGAAAGAC GGGCCAGATG CAGTAGACAT AGAGCTCTCT GCTGGGAGAG AAGCAAGAGA CCAGGTAATA AAAGCGGCAA AAGCCCACGG AAAAACTGTA ATCGTTTCTT CCCATGACTT TTCAAGGACT CCGGCTTTTC AGGAAATGAA AACTATTCTG GAAGAGGCAT TTCTGGCAGG GGCAGATATT GCGAAACTTG CTGTTATGCC GCAATCGAGA AGAGACGTAC TTAACCTGTT AAGAGTTGCA CTGGATGCCA GGGAGGCAGG AAATGCTGTA TGTACGATTG CCATGGGTAG GCTTGGAAAA CATACAAGGG TAATTGCTCC TTTCTACGGT TCGGTCCTGA CATATGCGGC TGTTAATAGT GAAGTTTCTG CCGCGCCCGG GCAATTTCAG GTAGACGAAG TAAAGAAGAT ATTGGAGCTG CTCGAATGA
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Protein sequence | MIHIGQLDLE KKAAVVAVIL EKSLEISRKA AKMGADLLEI RLDLLGIRDL ETAAETIRKV KSETGLPVIL TNRSITEGGK WEGKEADRIE LLTNLISLKD GPDAVDIELS AGREARDQVI KAAKAHGKTV IVSSHDFSRT PAFQEMKTIL EEAFLAGADI AKLAVMPQSR RDVLNLLRVA LDAREAGNAV CTIAMGRLGK HTRVIAPFYG SVLTYAAVNS EVSAAPGQFQ VDEVKKILEL LE
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